RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 LRRC66Q68CR7 880 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 ABHD13Q7L211 337 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 BEND5Q7L4P6 421 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 CPNE9Q8IYJ1 553 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TCEAL8Q8IYN2 117 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TTLQ8NG68 377 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 CASD1Q96PB1 797 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 MIPEPQ99797 713 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 FBRSQ9HAH7 460 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 DAPK2Q9UIK4 370 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TSPAN6O43657 245 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 CLDN7O95471 211 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 SLC7A2P52569 658 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 CHN2P52757 468 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 ATP12AP54707 1039 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 NR1D2Q14995 579 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 CHRNA6Q15825 494 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 RFTN2Q52LD8 501 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 BROXQ5VW32 411 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 ADGRD1Q6QNK2 874 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 DEF8Q6ZN54 512 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 HDDC2Q7Z4H3 204 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 EXOSC8Q96B26 276 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 SLC47A1Q96FL8 570 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 LRIG1Q96JA1 1093 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 C5orf34Q96MH7 638 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TSSK3Q96PN8 268 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 PAIP1Q9H074 479 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 RHBDL2Q9NX52 303 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TTC24A2A3L6 582 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 LEFTY1O75610 366 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 ANPEPP15144 967 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 GNAZP19086 355 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 HOXC12P31275 282 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 CDH5P33151 784 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 MAPK10P53779 464 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 PSMD4P55036 377 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 RFX4Q33E94 735 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TBC1D25Q3MII6 688 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TCEAL5Q5H9L2 206 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 PIK3R6Q5UE93 754 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 PTCRAQ6ISU1 281 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TTC27Q6P3X3 843 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 MZT2AQ6P582 158 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 GALNT18Q6P9A2 607 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 ZYG11AQ6WRX3 759 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 SLC36A4Q6YBV0 504 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TEX47Q8TBZ9 253 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 SLC9A6Q92581 669 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 SH3GL2Q99962 352 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 CCDC28BQ9BUN5 200 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 REXO4Q9GZR2 422 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TMEM98Q9Y2Y6 226 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 PRR5-ARHGAP8B1AHC4 643 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 MTX2O75431 263 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ATP1B2P14415 290 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 CHRNA4P43681 627 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 VPS26BQ4G0F5 336 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 COLEC12Q5KU26 742 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 DEFB123Q8N688 67 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 OR13C4Q8NGS5 318 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 CEP295NLQ96MC4 621 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ZNF641Q96N77 438 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 NUAK2Q9H093 628 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 PDLIM7Q9NR12 457 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 FAM221BA6H8Z2 402 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 FAM170BA6NMN3 283 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 SEPHS1P49903 392 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 CCR8P51685 355 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 GTF2H2Q13888 395 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 NCBP2-AS2Q69YL0 99 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 GTF2H2CQ6P1K8 395 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 KRT77Q7Z794 578 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 SAMD14Q8IZD0 417 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 IQCKQ8N0W5 287 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 MRPL43Q8N983 215 aaKnown RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 OR2T12Q8NG77 320 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ENKURQ8TC29 256 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 NOL11Q9H8H0 719 aaKnown RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ITM2CQ9NQX7 267 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 RPL26L1Q9UNX3 145 aaKnown RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 NUP98P52948 1817 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 RGPD1P0DJD0 1748 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 CNTN5O94779 1100 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 LATS1O95835 1130 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ALOX12P18054 663 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 RBMS1P29558 406 aaKnown RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 PGDP52209 483 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 RPL26P61254 145 aaKnown RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 TMEM126BQ8IUX1 230 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 CPSF7Q8N684 471 aaKnown RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 TMEM145Q8NBT3 493 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 SAMD4AQ9UPU9 718 aaKnown RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ERGIC3Q9Y282 383 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 COQ6Q9Y2Z9 468 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 TELO2Q9Y4R8 837 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 PKD1L3Q7Z443 1732 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 KPNA4O00629 521 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 GMFGO60234 142 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms