RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 NAA25Q14CX7 972 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 ANGPT1Q15389 498 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 USP41Q3LFD5 358 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 C18orf65Q6ZTR6 163 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 GET4Q7L5D6 327 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-213ENST00000530784 CDR2LQ86X02 465 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-213ENST00000530784 ZBTB8OSQ8IWT0 167 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 GPR65Q8IYL9 337 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 ADSSL1Q8N142 457 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 MYRIPQ8NFW9 859 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 FAM216AQ8WUB2 273 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 TMEM170AQ8WVE7 144 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 TMED6Q8WW62 240 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 MYADMQ96S97 322 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 HSD17B14Q9BPX1 270 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 SLC25A33Q9BSK2 321 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 NT5C3AQ9H0P0 336 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 MIOSQ9NXC5 875 aa6.99□□□□□ -1.29
CSDE1-213ENST00000530784 IFT80Q9P2H3 777 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-213ENST00000530784 PLXNA3P51805 1871 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 A0A1B0GUA9 196 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 PRR23D1E9PI22 279 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-213ENST00000530784 CEP104O60308 925 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 TSPAN3O60637 253 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 KCNJ13O60928 360 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 TADA2AO75478 443 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 PRR23D2P0DMB1 279 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-213ENST00000530784 LAMP2P13473 410 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 MXI1P50539 228 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 BNC1Q01954 994 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 TBL3Q12788 808 aaKnown RBP6.98□□□□□ -1.29
CSDE1-213ENST00000530784 HTR4Q13639 388 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 LIN9Q5TKA1 542 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 DENND6AQ8IWF6 608 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 DIS3L2Q8IYB7 885 aaKnown RBP6.98□□□□□ -1.29
CSDE1-213ENST00000530784 CD180Q99467 661 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 TBC1D17Q9HA65 648 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 SPATS2LQ9NUQ6 558 aaKnown RBP6.98□□□□□ -1.29
CSDE1-213ENST00000530784 PRMT7Q9NVM4 692 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-213ENST00000530784 TMEM51Q9NW97 253 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 ALKBH4Q9NXW9 302 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 LUZP4Q9P127 313 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 AGO1Q9UL18 857 aaKnown RBP6.98□□□□□ -1.29
CSDE1-213ENST00000530784 ARID2Q68CP9 1835 aa6.98□□□□□ -1.29
CSDE1-213ENST00000530784 WDR81Q562E7 1941 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 A0A1B0GVM2 712 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 CASTOR2A6NHX0 329 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 BTBD18B2RXH4 712 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 ANHXE9PGG2 379 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 PPP1R3DO95685 299 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 HNRNPA1P09651 372 aaKnown RBP eCLIP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 FDPSP14324 419 aaKnown RBP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 C21orf33P30042 268 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 ART1P52961 327 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 KIF5AQ12840 1032 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 ELAVL2Q12926 359 aaKnown RBP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 PRPF4BQ13523 1007 aaKnown RBP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 PSMD5Q16401 504 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 SPECC1Q5M775 1068 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 WDR45BQ5MNZ6 344 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 PPM1LQ5SGD2 360 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 DCLRE1AQ6PJP8 1040 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 PRSS55Q6UWB4 352 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 PRSS57Q6UWY2 283 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 USP34Q70CQ2 3546 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 CEP57Q86XR8 500 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 CPXM2Q8N436 756 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 NECAB1Q8N987 351 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 LSM14AQ8ND56 463 aaKnown RBP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 ERMNQ8TAM6 284 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 KCNG4Q8TDN1 519 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 GTF3C6Q969F1 213 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 MTMR9Q96QG7 549 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 ADPGKQ9BRR6 497 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 C2orf40Q9H1Z8 148 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 PDZD7Q9H5P4 517 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 C6orf106Q9H6K1 298 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 TUFT1Q9NNX1 390 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 OCIAD1Q9NX40 245 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 CACNG4Q9UBN1 327 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 FBXW11Q9UKB1 542 aa6.97□□□□□ -1.29
CSDE1-213ENST00000530784 ZFP37Q9Y6Q3 630 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-213ENST00000530784 A0A087WWV3 80 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 IGLV5-52A0A0A0MRZ9 124 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 C17orf113A0A1B0GUU1 675 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 EME2A4GXA9 379 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-213ENST00000530784 ARHGEF35A5YM69 484 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 PTGESO14684 152 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 SERPINI2O75830 405 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 ZBTB11O95625 1053 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-213ENST00000530784 DCNP07585 359 aaKnown RBP6.96□□□□□ -1.3
CSDE1-213ENST00000530784 HOXA9P31269 272 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 SEC61A1P61619 476 aaKnown RBP6.96□□□□□ -1.3
CSDE1-213ENST00000530784 MAPK6Q16659 721 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 EDRF1Q3B7T1 1238 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 TMEM95Q3KNT9 176 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 MOB3CQ70IA8 216 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 CREB3L2Q70SY1 520 aa6.96□□□□□ -1.3
CSDE1-213ENST00000530784 MTSS1LQ765P7 747 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms