RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 FOPNLQ96NB1 174 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 USP22Q9UPT9 525 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 KCNH4Q9UQ05 1017 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 TESMINQ9Y4I5 508 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 H0YAE9 185 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 FTH1P02794 183 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 SBK3P0C264 359 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 C7P10643 843 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 FMO3P31513 532 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 ALDH3A2P51648 485 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 IFITM2Q01629 132 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 ABRQ12979 859 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 SPATC1Q76KD6 591 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 PELI3Q8N2H9 469 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 SIDT2Q8NBJ9 832 aaKnown RBP17.61■□□□□ 0.41
LTBP3-210ENST00000528516 FAR1Q8WVX9 515 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 C16orf70Q9BSU1 422 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 OSBPL2Q9H1P3 480 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 ZNF556Q9HAH1 456 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 CPNE5Q9HCH3 593 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 A8MT66 165 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 KPNA6O60684 536 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 LRG1P02750 347 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 PTPN2P17706 415 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 SLC6A2P23975 617 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 IGFBP6P24592 240 aaPredicted RBP17.6■□□□□ 0.41
LTBP3-210ENST00000528516 GDF5P43026 501 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 HMGCS1Q01581 520 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 KCNA10Q16322 511 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 DOK6Q6PKX4 331 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 CCBE1Q6UXH8 406 aaPredicted RBP17.6■□□□□ 0.41
LTBP3-210ENST00000528516 OR13J1Q8NGT2 312 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 DSN1Q9H410 356 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 TNFRSF12AQ9NP84 129 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 DYRK4Q9NR20 520 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 CD84Q9UIB8 345 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 PMF1-BGLAPU3KQ54 211 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 CACNA1CQ13936 2221 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 TFECO14948 347 aaPredicted RBP17.6■□□□□ 0.41
LTBP3-210ENST00000528516 MATN3O15232 486 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 CST1P01037 141 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 KCNA5P22460 613 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 PRKACGP22612 351 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 PPP5CP53041 499 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 LAPTM4AQ15012 233 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 RETSATQ6NUM9 610 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 TMEM135Q86UB9 458 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 IQCF2Q8IXL9 164 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 HS3ST5Q8IZT8 346 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 VPS9D1Q9Y2B5 631 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 CRYZL1O95825 349 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 ANGPTL1O95841 491 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 PRSS56P0CW18 603 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 APLP1P51693 650 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 DGKEP52429 567 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 SLC16A1P53985 500 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 TSTD2Q5T7W7 516 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 USP50Q70EL3 339 aaPredicted RBP17.6■□□□□ 0.41
LTBP3-210ENST00000528516 EFL1Q7Z2Z2 1120 aaKnown RBP17.6■□□□□ 0.41
LTBP3-210ENST00000528516 TRMT11Q7Z4G4 463 aaKnown RBP17.6■□□□□ 0.41
LTBP3-210ENST00000528516 GALNT12Q8IXK2 581 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 DUS3LQ96G46 650 aaKnown RBP17.6■□□□□ 0.41
LTBP3-210ENST00000528516 NPY6RQ99463 290 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 IL37Q9NZH6 218 aa17.6■□□□□ 0.41
LTBP3-210ENST00000528516 FAM172BPA6NC97 362 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 SLC22A3O75751 556 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 KRT6AP02538 564 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 KRT6BP04259 564 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 CAPN1P07384 714 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 GSTM1P09488 218 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 LPOP22079 712 aaPredicted RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 HOXD10P28358 340 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 CASP3P42574 277 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 PSMD8P48556 350 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 GNG2P59768 71 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 CD47Q08722 323 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 HIST2H2ACQ16777 129 aaPredicted RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 VPS37AQ8NEZ2 397 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 OR6Q1Q8NGQ2 317 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 CNIH3Q8TBE1 160 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 HDAC2Q92769 488 aaKnown RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 NSUN5Q96P11 429 aaKnown RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 FCF1Q9Y324 198 aaKnown RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 COL2A1P02458 1487 aaPredicted RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 PNMA8CA0A1B0GUJ8 204 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 TYMPP19971 482 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 HOXA11P31270 313 aaPredicted RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 MAGEA12P43365 314 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 ST8SIA6P61647 398 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 ADARB1P78563 741 aaKnown RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 IRF8Q02556 426 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 INCA1Q0VD86 236 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 ZNF789Q5FWF6 425 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 CATSPEREQ5SY80 951 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 SMYD5Q6GMV2 418 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 SLC22A17Q8WUG5 538 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 CCSER2Q9H7U1 834 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 MEAF6Q9HAF1 191 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 AASSQ9UDR5 926 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 QSER1Q2KHR3 1735 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms