RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 LIN7AO14910 233 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-212ENST00000527887 KATNA1O75449 491 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 CREG1O75629 220 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 FTCDO95954 541 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 FDFT1P37268 417 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 TERF1P54274 439 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 GNG11P61952 73 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 CDH17Q12864 832 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 DNASE1L3Q13609 305 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 POU6F1Q14863 301 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 ZNF658BQ4V348 819 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-212ENST00000527887 SEL1L2Q5TEA6 688 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 PWWP2BQ6NUJ5 590 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 OR4E2Q8NGC2 313 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 LCN9Q8WX39 176 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.81□□□□□ -0.2
CAPN1-212ENST00000527887 FERD3LQ96RJ6 166 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 OR52A5Q9H2C5 316 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 SRMSQ9H3Y6 488 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 POMT2Q9UKY4 750 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 PACSIN2Q9UNF0 486 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-212ENST00000527887 R3HDM2Q9Y2K5 976 aaKnown RBP13.81□□□□□ -0.2
CAPN1-212ENST00000527887 KCNMB2Q9Y691 235 aa13.81□□□□□ -0.2
CAPN1-212ENST00000527887 MKRN2OSH3BPM6 223 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 CPNE3O75131 537 aaKnown RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 SUN1O94901 812 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 FTH1P02794 183 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 KLK3P07288 261 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 EBLN1P0CF75 366 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 TPH1P17752 444 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 POLR2CP19387 275 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 KPNA2P52292 529 aaKnown RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 GDF10P55107 478 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 RPS15P62841 145 aaKnown RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 KCNAB1Q14722 419 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 DUS1LQ6P1R4 473 aaKnown RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 PACS1Q6VY07 963 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 CERS6Q6ZMG9 384 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 NLRP9Q7RTR0 991 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 LILRA3Q8N6C8 439 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 DNAAF3Q8N9W5 541 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 THAP4Q8WY91 577 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 TFGQ92734 400 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 PEX13Q92968 403 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 ZNF501Q96CX3 271 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 FAM8A1Q9UBU6 413 aa13.8□□□□□ -0.2
CAPN1-212ENST00000527887 MRPS18BQ9Y676 258 aaKnown RBP13.8□□□□□ -0.2
CAPN1-212ENST00000527887 PIPSLA2A3N6 862 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 HEATR9A2RTY3 570 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 LIASO43766 372 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 KDM1AO60341 852 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 SCRG1O75711 98 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 TIAF1O95411 115 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 NTRK1P04629 796 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 CDH3P22223 829 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 PTPN4P29074 926 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 PRDX3P30048 256 aaKnown RBP13.79□□□□□ -0.2
CAPN1-212ENST00000527887 PPARGP37231 505 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-212ENST00000527887 CDKN1CP49918 316 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-212ENST00000527887 ERV3-1Q14264 604 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 OASLQ15646 514 aaKnown RBP13.79□□□□□ -0.2
CAPN1-212ENST00000527887 DBN1Q16643 649 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 SYT10Q6XYQ8 523 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 ZNF517Q6ZMY9 492 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-212ENST00000527887 SYVN1Q86TM6 617 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 AMIGO1Q86WK6 493 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 TMEM126BQ8IUX1 230 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 APLFQ8IW19 511 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-212ENST00000527887 PIANPQ8IYJ0 282 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 CT55Q8WUE5 264 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 CPT1BQ92523 772 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 ABHD17AQ96GS6 310 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 SGSM3Q96HU1 749 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 RANBP9Q96S59 729 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 PITPNM3Q9BZ71 974 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 TWSG1Q9GZX9 223 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 SOHLH2Q9NX45 425 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 POLG2Q9UHN1 485 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 SERTAD3Q9UJW9 196 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 GUCA1BQ9UMX6 200 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 FARSAQ9Y285 508 aaKnown RBP13.79□□□□□ -0.2
CAPN1-212ENST00000527887 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
CAPN1-212ENST00000527887 TCRBV7S2A1N4TA0A589 114 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 C2orf74A8MZ97 194 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 E7EVH7 732 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 CCL22O00626 93 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 ZIC2O95409 532 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-212ENST00000527887 RAB40ALP0C0E4 278 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 OR56A5P0C7T3 313 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 ADRA1DP25100 572 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 CASQ1P31415 396 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 CASRP41180 1078 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 LMAN1P49257 510 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 NFKB2Q00653 900 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 BOP1Q14137 746 aaKnown RBP13.78□□□□□ -0.2
CAPN1-212ENST00000527887 LACTB2Q53H82 288 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-212ENST00000527887 IZUMO3Q5VZ72 239 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 TCTN3Q6NUS6 607 aa13.78□□□□□ -0.2
CAPN1-212ENST00000527887 C4orf22Q6V702 233 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms