RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 PNRC1Q12796 327 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-211ENST00000525970 RPA4Q13156 261 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 WASHC2DQ5SRD0 308 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 RAB12Q6IQ22 244 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 NOTUMQ6P988 496 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 TMEM270Q6UE05 265 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 PALB2Q86YC2 1186 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 CNTN4Q8IWV2 1026 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 UXS1Q8NBZ7 420 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 OR5R1Q8NH85 324 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 HMGCLL1Q8TB92 370 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 THAP6Q8TBB0 222 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 HEXDCQ8WVB3 486 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 LPAR1Q92633 364 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 RAD54LQ92698 747 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 ATP6V0A1Q93050 837 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 TEKT1Q969V4 418 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 ST6GALNAC6Q969X2 333 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 OTUB1Q96FW1 271 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-211ENST00000525970 SEPHS2Q99611 448 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 ISCUQ9H1K1 167 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 TBC1D17Q9HA65 648 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 IARS2Q9NSE4 1012 aaKnown RBP4.39□□□□□ -1.71
CSDE1-211ENST00000525970 IL36RNQ9UBH0 155 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 FBXL2Q9UKC9 423 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 ITGA11Q9UKX5 1188 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 ISY1Q9ULR0 285 aaKnown RBP4.39□□□□□ -1.71
CSDE1-211ENST00000525970 ABT1Q9ULW3 272 aaKnown RBP4.39□□□□□ -1.71
CSDE1-211ENST00000525970 PRAG1Q86YV5 1406 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 IGHV4-28A0A0C4DH34 117 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 PRR23D1E9PI22 279 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 H0YGN5 161 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 DVL1O14640 695 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 SELENOFO60613 162 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 PRR23D2P0DMB1 279 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 NAGAP17050 411 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 CDC25AP30304 524 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 SNU13P55769 128 aaKnown RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 IL1RL1Q01638 556 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 PPA1Q15181 289 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 RPS6KA1Q15418 735 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 HFEQ30201 348 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 ODF3L2Q3SX64 289 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 KBTBD12Q3ZCT8 623 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 AMZ1Q400G9 498 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 KCNT1Q5JUK3 1230 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 TXNRD3NBQ6F5E7 133 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 KLHL7Q8IXQ5 586 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 SLC5A8Q8N695 610 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 ZFAND2BQ8WV99 257 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 NSMAFQ92636 917 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 BCL2L2Q92843 193 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 SNRNP40Q96DI7 357 aaKnown RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 HES6Q96HZ4 224 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 SPATA33Q96N06 139 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 TMEM237Q96Q45 408 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 MMTAG2Q9BU76 263 aaKnown RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 SLA2Q9H6Q3 261 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 CATSPERBQ9H7T0 1116 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 KRCC1Q9NPI7 259 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 DNAJC17Q9NVM6 304 aaKnown RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 DPP3Q9NY33 737 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 APPL1Q9UKG1 709 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 RNF150Q9ULK6 438 aa4.38□□□□□ -1.71
CSDE1-211ENST00000525970 SPAG9O60271 1321 aaKnown RBP4.38□□□□□ -1.71
CSDE1-211ENST00000525970 YDJCA8MPS7 323 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 BECN2A8MW95 431 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 SOCS6O14544 535 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 SLC16A5O15375 505 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 ST8SIA3O43173 380 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 ITM2AO43736 263 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 WISP2O76076 250 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 SLC16A8O95907 504 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 CSN3P07498 182 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 PLA2G4BP0C869 781 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 UROSP10746 265 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 ACAT1P24752 427 aaKnown RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 AZGP1P25311 298 aaKnown RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 WNT5AP41221 380 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 FRKP42685 505 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 LHX1P48742 406 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 MXI1P50539 228 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 SLC12A3P55017 1021 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 UBASH3AP57075 661 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 ST8SIA6P61647 398 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 FAM174BQ3ZCQ3 159 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 TTC31Q49AM3 519 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 ZNF789Q5FWF6 425 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 GRTP1Q5TC63 336 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 KIAA1161Q6NSJ0 714 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 ZNF549Q6P9A3 640 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 DGLUCYQ7Z3D6 616 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 RABEPKQ7Z6M1 372 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 CTU1Q7Z7A3 348 aaKnown RBP4.37□□□□□ -1.71
CSDE1-211ENST00000525970 SFRP1Q8N474 314 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 TEX9Q8N6V9 391 aa4.37□□□□□ -1.71
CSDE1-211ENST00000525970 RTL3Q8N8U3 475 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms