RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 OR6C1Q96RD1 312 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 MAP3K3Q99759 626 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 CARD6Q9BX69 1037 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 TFB2MQ9H5Q4 396 aaKnown RBP17.05■□□□□ 0.32
NR1H3-228ENST00000525441 APMAPQ9HDC9 416 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 MARCH4Q9P2E8 410 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-228ENST00000525441 ASF1AQ9Y294 204 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 SDK2Q58EX2 2172 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 ZFHX4Q86UP3 3567 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 IGSF10Q6WRI0 2623 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 IGHV5-51A0A0C4DH38 117 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 SLC5A10A0PJK1 596 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 MAGEB16A2A368 324 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 USP27XA6NNY8 438 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 ERVH48-1M5A8F1 160 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 ZNF185O15231 689 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 EFSO43281 561 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 KDM1AO60341 852 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 STK17BO94768 372 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 VAPBO95292 243 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 POLR2CP19387 275 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-228ENST00000525441 MAP4P27816 1152 aaKnown RBP17.04■□□□□ 0.32
NR1H3-228ENST00000525441 SH3BP2P78314 561 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 ACY1Q03154 408 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 BRD3Q15059 726 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 TMED2Q15363 201 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 PPP1R7Q15435 360 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 KCTD19Q17RG1 926 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-228ENST00000525441 SOWAHCQ53LP3 525 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-228ENST00000525441 ANKRD22Q5VYY1 191 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 PTRHD1Q6GMV3 140 aaKnown RBP17.04■□□□□ 0.32
NR1H3-228ENST00000525441 LDB1Q86U70 411 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-228ENST00000525441 NLGN4XQ8N0W4 816 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 LSM14AQ8ND56 463 aaKnown RBP17.04■□□□□ 0.32
NR1H3-228ENST00000525441 PHC3Q8NDX5 983 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 NLGN4YQ8NFZ3 816 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-228ENST00000525441 OR52E1Q8NGJ3 308 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 ASZ1Q8WWH4 475 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 MFSD3Q96ES6 412 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 PANX3Q96QZ0 392 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 HGH1Q9BTY7 390 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 PDE7BQ9NP56 450 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 POLG2Q9UHN1 485 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 GNPTGQ9UJJ9 305 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 PILRAQ9UKJ1 303 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 NEU2Q9Y3R4 380 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 TMEM184BQ9Y519 407 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-228ENST00000525441 NBEAQ8NFP9 2946 aa17.04■□□□□ 0.32
NR1H3-228ENST00000525441 GSAPA4D1B5 854 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 SDR42E2A6NKP2 422 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 ATXN7O15265 892 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-228ENST00000525441 AVILO75366 819 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 TMEM63AO94886 807 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 ZBTB11O95625 1053 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-228ENST00000525441 APOA4P06727 396 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 ITGB6P18564 788 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 ACADLP28330 430 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 HSD11B2P80365 405 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 PRKG2Q13237 762 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 MAP7Q14244 749 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 DNAJC21Q5F1R6 531 aaKnown RBP17.03■□□□□ 0.32
NR1H3-228ENST00000525441 TMTC4Q5T4D3 741 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 RNF187Q5TA31 235 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-228ENST00000525441 KIAA0930Q6ICG6 404 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-228ENST00000525441 CES3Q6UWW8 571 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 CAND1Q86VP6 1230 aaKnown RBP17.03■□□□□ 0.32
NR1H3-228ENST00000525441 BPHLQ86WA6 291 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-228ENST00000525441 AMIGO1Q86WK6 493 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 PPP1R3BQ86XI6 285 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 RASGRP3Q8IV61 690 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 TBC1D21Q8IYX1 336 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 KIAA1143Q96AT1 154 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-228ENST00000525441 TCF12Q99081 682 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 NAPGQ99747 312 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-228ENST00000525441 ULBP3Q9BZM4 244 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 SPRY4Q9C004 299 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 POMT2Q9UKY4 750 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 RARRES3Q9UL19 164 aa17.03■□□□□ 0.32
NR1H3-228ENST00000525441 FAM237BA0A1B0GVD1 139 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 BHMG1C9JSJ3 638 aaPredicted RBP17.02■□□□□ 0.32
NR1H3-228ENST00000525441 GOLGA8MH3BSY2 632 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 KPNA5O15131 536 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 MAP3K7O43318 606 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 FGF5P12034 268 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 CDH3P22223 829 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 RPS3P23396 243 aaKnown RBP eCLIP17.02■□□□□ 0.32
NR1H3-228ENST00000525441 CCR7P32248 378 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 SHMT2P34897 504 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 ARCN1P48444 511 aaKnown RBP17.02■□□□□ 0.32
NR1H3-228ENST00000525441 KPNA2P52292 529 aaKnown RBP17.02■□□□□ 0.32
NR1H3-228ENST00000525441 HSPA14Q0VDF9 509 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 SRSF6Q13247 344 aaKnown RBP17.02■□□□□ 0.32
NR1H3-228ENST00000525441 TUBB3Q13509 450 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.02■□□□□ 0.32
NR1H3-228ENST00000525441 TAF1BQ53T94 588 aaPredicted RBP17.02■□□□□ 0.32
NR1H3-228ENST00000525441 NAPRTQ6XQN6 538 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 PPIL6Q8IXY8 311 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 SLC22A15Q8IZD6 547 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 ESX1Q8N693 406 aa17.02■□□□□ 0.32
NR1H3-228ENST00000525441 OR5AR1Q8NGP9 310 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms