RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 NCF4Q15080 339 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 PDK3Q15120 406 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 SHBQ15464 509 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 HIST2H2ACQ16777 129 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 CERKLQ49MI3 558 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 GXYLT1Q4G148 440 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 Q5PR19 223 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 PHYHD1Q5SRE7 291 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 CARD17Q5XLA6 110 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 TBC1D9BQ66K14 1250 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 C18orf63Q68DL7 685 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 BICRALQ6AI39 1079 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 TEX38Q6PEX7 206 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 FAM198BQ6UWH4 519 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 BEND4Q6ZU67 534 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 MICALCLQ6ZW33 695 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 MOB3CQ70IA8 216 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 RHOUQ7L0Q8 258 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 DET1Q7L5Y6 550 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 FOXP4Q8IVH2 680 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 FAM20CQ8IXL6 584 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 FAM126BQ8IXS8 530 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 CRYBG2Q8N1P7 616 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 DNAAF3Q8N9W5 541 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 MINDY2Q8NBR6 621 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 FLAD1Q8NFF5 587 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 BPIFCQ8NFQ6 507 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 FAM76AQ8TAV0 307 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 POC1BQ8TC44 478 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 TSEN15Q8WW01 171 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 LINC01599Q8WXQ3 324 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 LARP4BQ92615 738 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 LENG9Q96B70 501 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 PEX11GQ96HA9 241 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 OXNAD1Q96HP4 312 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 THOC3Q96J01 351 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 C12orf66Q96MD2 445 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 ZNF583Q96ND8 569 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 OR1F2PQ96R84 312 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 SPAG8Q99932 426 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 C11orf70Q9BRQ4 267 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 PTDSS2Q9BVG9 487 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 SF3B5Q9BWJ5 86 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 TSPYL1Q9H0U9 437 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 SLC26A1Q9H2B4 701 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 KCNK15Q9H427 330 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 AZI2Q9H6S1 392 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 MAGEF1Q9HAY2 307 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 TMEM165Q9HC07 324 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 VAT1LQ9HCJ6 419 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 ATXN10Q9UBB4 475 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 MGAT4CQ9UBM8 478 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 PEF1Q9UBV8 284 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 Q9UFV3 132 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 NUDT5Q9UKK9 219 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 NDRG4Q9ULP0 352 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 SORCS3Q9UPU3 1222 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 NIP7Q9Y221 180 aaKnown RBP eCLIP4.39□□□□□ -1.71
CD44-213ENST00000525209 SLC9A8Q9Y2E8 581 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 AAR2Q9Y312 384 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 UTYO14607 1347 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 PFASO15067 1338 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 PNPLA7Q6ZV29 1317 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 CFAP65Q6ZU64 1925 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 FANCAO15360 1455 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 ERICH2A1L162 156 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 CDHR4A6H8M9 788 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 MEI4A8MW99 385 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 KBTBD13C9JR72 458 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 MAP2K7O14733 419 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 CTDSPLO15194 276 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 ZNF264O43296 627 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 SEC14L5O43304 696 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 ARHGEF9O43307 516 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 TRIM13O60858 407 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 CSO75390 466 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 WBP4O75554 376 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 CBR3O75828 277 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 RSL1D1O76021 490 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 TOMM70O94826 608 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 SUN1O94901 812 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 KLHL2O95198 593 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 PGLSO95336 258 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 TFP02787 698 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 ALDOAP04075 364 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 UGT2B4P06133 528 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 PABPC4LP0CB38 370 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 APEHP13798 732 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 ZNF182P17025 639 aaPredicted RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 CYP2B6P20813 491 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 SLC6A6P31641 620 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 RPL9P32969 192 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 PTGS2P35354 604 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 MMP13P45452 471 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 ME1P48163 572 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 LEPRP48357 1165 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 CRYBB1P53674 252 aaPredicted RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 CLDN8P56748 225 aa4.38□□□□□ -1.71
CD44-213ENST00000525209 EEFSECP57772 596 aaKnown RBP4.38□□□□□ -1.71
CD44-213ENST00000525209 MYL6P60660 151 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms