RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PFDN6O15212 129 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 RIPK2O43353 540 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 NUDT21O43809 227 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 PRAMEF10O60809 474 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 VPS26AO75436 327 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 GPC4O75487 556 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 UBXN7O94888 489 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 MT-CO3P00414 261 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 ESR1P03372 595 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 MPOP05164 745 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 APOA4P06727 396 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 PROS1P07225 676 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 JUPP14923 745 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 PVRP15151 417 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 AMD1P17707 334 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 XRCC1P18887 633 aaPredicted RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 RPS3P23396 243 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 PSMB5P28074 263 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 STX2P32856 288 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 SEPHS1P49903 392 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 DUSP3P51452 185 aaPredicted RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 PDX1P52945 283 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 YBX1P67809 324 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 IRF9Q00978 393 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 PDAP1Q13442 181 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 SPIDRQ14159 915 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 FASTKQ14296 549 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC29A2Q14542 456 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 USP10Q14694 798 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 KCNAB1Q14722 419 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 KIR2DS5Q14953 304 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 TMED2Q15363 201 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 C18orf21Q32NC0 220 aaPredicted RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 FBXO48Q5FWF7 155 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 MROH9Q5TGP6 573 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 AGAP9Q5VTM2 703 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 FAM45BPQ6NSW5 357 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 IRGCQ6NXR0 463 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF449Q6P9G9 518 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 SUSD1Q6UWL2 747 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF574Q6ZN55 896 aaPredicted RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 MBOAT1Q6ZNC8 495 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 TMEM26Q6ZUK4 368 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 GLRX5Q86SX6 157 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 PDZD3Q86UT5 571 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 LRRC6Q86X45 466 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 CNTN4Q8IWV2 1026 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC22A15Q8IZD6 547 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 OR52E1Q8NGJ3 308 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 FAM45AQ8TCE6 357 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 ANKRD49Q8WVL7 239 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 ASZ1Q8WWH4 475 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 CDKL2Q92772 493 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 DLG3Q92796 817 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 NAT6Q93015 286 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 EXT2Q93063 718 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 ALKBH8Q96BT7 664 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 LINGO1Q96FE5 620 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 VPS39Q96JC1 886 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 PANX3Q96QZ0 392 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 GFM1Q96RP9 751 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 RBBP8Q99708 897 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 SCNM1Q9BWG6 230 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 TSSK1BQ9BXA7 367 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 TXLNGYQ9BZA5 131 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 EPB41L4BQ9H329 900 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 LATS2Q9NRM7 1088 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 ZNF358Q9NW07 568 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 WDR70Q9NW82 654 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 SPHK1Q9NYA1 384 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 UTP6Q9NYH9 597 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 TXNDC16Q9P2K2 825 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 CTNNAL1Q9UBT7 734 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 TBK1Q9UHD2 729 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 SLC24A2Q9UI40 661 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 TRMT6Q9UJA5 497 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 ACSL5Q9ULC5 683 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 ICKQ9UPZ9 632 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 VWA7Q9Y334 891 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 DHRS7Q9Y394 339 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 DNMT3AQ9Y6K1 912 aaPredicted RBP4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 LRP4O75096 1905 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 GON4LQ3T8J9 2241 aa4.48□□□□□ -1.69
CHMP4A-202ENST00000524955 OTOGLQ3ZCN5 2332 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 PLXNB3Q9ULL4 1909 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 A0A087WUV0 522 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 IGHV5-10-1A0A0J9YXX1 117 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 EXOC1LA0A1B0GW35 172 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 TLDC2A0PJX2 215 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 HMX2A2RU54 273 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GSAPA4D1B5 854 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 NPEPPSL1A6NEC2 478 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 NCF1BA6NI72 391 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 OR5K4A6NMS3 321 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 NCF1CA8MVU1 366 aaPredicted RBP4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ARHGEF33A8MVX0 844 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 ISM1B1AKI9 464 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 D6RAR5 112 aa4.47□□□□□ -1.69
CHMP4A-202ENST00000524955 GOLGA8RI6L899 631 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms