RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 IL13RA2Q14627 380 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 FCN2Q15485 313 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 DCAF6Q58WW2 860 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 SPNS3Q6ZMD2 512 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 TMEM179Q6ZVK1 233 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 KLHDC8BQ8IXV7 354 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 ZNF248Q8NDW4 579 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 MCPH1Q8NEM0 835 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 OR6Y1Q8NGX8 325 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 SETD7Q8WTS6 366 aaKnown RBP3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 ING5Q8WYH8 240 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 KTI12Q96EK9 354 aaPredicted RBP3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 GFRA4Q9GZZ7 299 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 NT5C3AQ9H0P0 336 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 G6PC2Q9NQR9 355 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 ATP8A2Q9NTI2 1148 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 SETD4Q9NVD3 440 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 NLKQ9UBE8 527 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 CLDN16Q9Y5I7 305 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
NSMCE2-211ENST00000523549 MGAM2Q2M2H8 2515 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 ARHGAP10A1A4S6 786 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 E7EVH7 732 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 K7ENP7 123 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 CLGNO14967 610 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 ECI2O75521 394 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 BAG3O95817 575 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 CH25HO95992 272 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 MYF6P23409 242 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 ACTN2P35609 894 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 PTPN9P43378 593 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 MCM2P49736 904 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 SNAP25P60880 206 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 GFPT1Q06210 699 aaPredicted RBP3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 FOXO1Q12778 655 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 BAATQ14032 418 aaPredicted RBP3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 DHX34Q14147 1143 aaKnown RBP3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 GIT2Q14161 759 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 TMEM266Q2M3C6 531 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 AP5B1Q2VPB7 878 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 FHL5Q5TD97 284 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 FAM69BQ5VUD6 431 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 INO80CQ6PI98 192 aaPredicted RBP3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 UNQ6126/PRO20091Q6UXV3 157 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 CYP26C1Q6V0L0 522 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 SEPT14Q6ZU15 432 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 NEK10Q6ZWH5 1172 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 LRRC43Q8N309 656 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 AADATQ8N5Z0 425 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 IL17RCQ8NAC3 791 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 SETD9Q8NE22 299 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 LINS1Q8NG48 757 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 CTCFLQ8NI51 663 aaPredicted RBP3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 NCSTNQ92542 709 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 FAM20AQ96MK3 541 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 CASD1Q96PB1 797 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 ZNF385AQ96PM9 386 aaKnown RBP3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 FTHL17Q9BXU8 183 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 EGLN1Q9GZT9 426 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 ZNF334Q9HCZ1 680 aaPredicted RBP3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 PADI3Q9ULW8 664 aa3.77□□□□□ -1.81
NSMCE2-211ENST00000523549 PDS5AQ29RF7 1337 aaKnown RBP3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 J3KR12 359 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 SYNCRIPO60506 623 aaKnown RBP3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 IL1AP01583 271 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 IGHV4-30-4P0DP06 118 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 CTPS1P17812 591 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 GDI1P31150 447 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 CENPAP49450 140 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 SLC18A2Q05940 514 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 GABPAQ06546 454 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 PON2Q15165 354 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 ME3Q16798 604 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 PLEKHA7Q6IQ23 1121 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 NAA16Q6N069 864 aaPredicted RBP3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 KLHL24Q6TFL4 600 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 FOXL2NBQ6ZUU3 175 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 CACNA2D3Q8IZS8 1091 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 WDSUB1Q8N9V3 476 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 ZMIZ2Q8NF64 920 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 KCNE4Q8WWG9 221 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 DNAAF4Q8WXU2 420 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 DUX3Q96PT4 197 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 C16orf70Q9BSU1 422 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 CRB3Q9BUF7 120 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 EBF2Q9HAK2 575 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 ADD3Q9UEY8 706 aaKnown RBP3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 COL1A2P08123 1366 aa3.76□□□□□ -1.81
NSMCE2-211ENST00000523549 CROCCQ5TZA2 2017 aa3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 SHANK1Q9Y566 2161 aa3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 IGHV4OR15-8A0A075B7B6 117 aa3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 HMX3A6NHT5 357 aa3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 HBP1O60381 514 aa3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 ZG16O60844 167 aa3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 VNN2O95498 520 aa3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 PMS2P2O95744 297 aa3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 NDUFB10O96000 172 aa3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 APOHP02749 345 aaPredicted RBP3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 CSTBP04080 98 aaKnown RBP3.75□□□□□ -1.81
NSMCE2-211ENST00000523549 FCARP24071 287 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms