RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TARM1B6A8C7 271 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 EIF3FO00303 357 aaPredicted RBP13.08□□□□□ -0.32
CLK4-210ENST00000522136 TM9SF1O15321 606 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 SDC3O75056 442 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 ZWINTO95229 277 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 MATN4O95460 622 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 IDSP22304 550 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 ACADLP28330 430 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 CTSKP43235 329 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 BLKP51451 505 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 ILF3Q12906 894 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLK4-210ENST00000522136 RPA4Q13156 261 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 LRP8Q14114 963 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 CLCA4Q14CN2 919 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 PHKG1Q16816 387 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 PEAR1Q5VY43 1037 aaPredicted RBP13.08□□□□□ -0.32
CLK4-210ENST00000522136 SBSNQ6UWP8 590 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 NEK10Q6ZWH5 1172 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 ATOH8Q96SQ7 321 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 MRPL57Q9BQC6 102 aaKnown RBP13.08□□□□□ -0.32
CLK4-210ENST00000522136 MECRQ9BV79 373 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 ZDHHC5Q9C0B5 715 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 MRPL46Q9H2W6 279 aaKnown RBP13.08□□□□□ -0.32
CLK4-210ENST00000522136 DPEP2Q9H4A9 486 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 SMOC1Q9H4F8 434 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 SCHIP1Q9P0W5 487 aaPredicted RBP13.08□□□□□ -0.32
CLK4-210ENST00000522136 CIDEBQ9UHD4 219 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 ACSL5Q9ULC5 683 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 RNF112Q9ULX5 631 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 TRBV23OR9-2A0A075B6M9 112 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 KLHL33A6NCF5 533 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 UBXN8O00124 270 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 KCNJ13O60928 360 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 RBP1P09455 135 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 SLC35G4P0C7Q5 338 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 BDKRB1P46663 353 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 SLC18A1P54219 525 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 PLOD1Q02809 727 aaPredicted RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 TCF15Q12870 199 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 CCDC153Q494R4 210 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 DUS1LQ6P1R4 473 aaKnown RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 UBE2R2Q712K3 238 aaPredicted RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 TAF8Q7Z7C8 310 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 PDZD3Q86UT5 571 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 SFTPA2Q8IWL1 248 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 PRSS33Q8NF86 280 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 STAG3L4Q8TBR4 150 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 LMX1AQ8TE12 382 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 INSM2Q96T92 566 aaPredicted RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 PDE10AQ9Y233 779 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 CUL9Q8IWT3 2517 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 PRAMEF33A0A0G2JMD5 474 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 NCF1BA6NI72 391 aaPredicted RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 OR52A4PA6NMU1 304 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 NCF1CA8MVU1 366 aaPredicted RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 ARHGEF33A8MVX0 844 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 G3V2L1 256 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 GFYI3L273 518 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 MTHFD2P13995 350 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 NCF1P14598 390 aaPredicted RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 CPA3P15088 417 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 KPNA2P52292 529 aaKnown RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 PPP1R3AQ16821 1122 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 DUOXA1Q1HG43 343 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 CCSMST1Q4G0I0 132 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 HHATQ5VTY9 493 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 CAPRIN2Q6IMN6 1127 aaKnown RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 MBOAT1Q6ZNC8 495 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 GPSM1Q86YR5 675 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 RASGRP3Q8IV61 690 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 RHEBL1Q8TAI7 183 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 TFGQ92734 400 aaPredicted RBP13.07□□□□□ -0.32
CLK4-210ENST00000522136 C12orf66Q96MD2 445 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 GSDMCQ9BYG8 508 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 ARRDC1-AS1Q9H2J1 176 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 ACSS2Q9NR19 701 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 UCKL1Q9NWZ5 548 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 TAAR2Q9P1P5 351 aa13.07□□□□□ -0.32
CLK4-210ENST00000522136 GPR179Q6PRD1 2367 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 VPS13AQ96RL7 3174 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 SUPT3HB4E1H0 165 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 DLX3O60479 287 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 KERAO60938 352 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 PSIP1O75475 530 aaKnown RBP13.06□□□□□ -0.32
CLK4-210ENST00000522136 SUPT3HO75486 399 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 GUCA1CO95843 209 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 DHRS4L1P0CG22 281 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 ALDH3A1P30838 453 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 SERPINB4P48594 390 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 IL9RQ01113 521 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 BNIP3Q12983 259 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 GRIK2Q13002 908 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 PCLAFQ15004 111 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 SHBQ15464 509 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 UAP1L1Q3KQV9 507 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 FBXO48Q5FWF7 155 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.06□□□□□ -0.32
CLK4-210ENST00000522136 TTC19Q6DKK2 380 aaPredicted RBP13.06□□□□□ -0.32
CLK4-210ENST00000522136 RALGAPA1Q6GYQ0 2036 aa13.06□□□□□ -0.32
CLK4-210ENST00000522136 OR5AR1Q8NGP9 310 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms