RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 TMOD1P28289 359 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 NAMPTP43490 491 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 EFNA5P52803 228 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 GTF2BQ00403 316 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 FAM27E3Q08E93 113 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 CAPSQ13938 189 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 TFDP1Q14186 410 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 MXD4Q14582 209 aaPredicted RBP4.04□□□□□ -1.76
CLK4-207ENST00000520909 KRT31Q15323 416 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 LONRF1Q17RB8 773 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 EDRF1Q3B7T1 1238 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 CCDC40Q4G0X9 1142 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 ZCWPW2Q504Y3 356 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 MAP3K21Q5TCX8 1036 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 CXCL17Q6UXB2 119 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 ZBTB8OSQ8IWT0 167 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 RNF149Q8NC42 400 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 CPT1BQ92523 772 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 FIG4Q92562 907 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 KIAA1191Q96A73 305 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 ANKRD9Q96BM1 317 aaPredicted RBP4.04□□□□□ -1.76
CLK4-207ENST00000520909 HVCN1Q96D96 273 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 CNOT6LQ96LI5 555 aaKnown RBP4.04□□□□□ -1.76
CLK4-207ENST00000520909 SCLT1Q96NL6 688 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 MAP7D2Q96T17 732 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 TUBGCP2Q9BSJ2 902 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 KATNAL1Q9BW62 490 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 STRA6Q9BX79 667 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 BARHL1Q9BZE3 327 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 CLPBQ9H078 707 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 FAM49AQ9H0Q0 323 aaPredicted RBP4.04□□□□□ -1.76
CLK4-207ENST00000520909 UPF3AQ9H1J1 476 aaKnown RBP4.04□□□□□ -1.76
CLK4-207ENST00000520909 ST6GALNAC4Q9H4F1 302 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 TMEM206Q9H813 350 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 FBRSL1Q9HCM7 1045 aaKnown RBP4.04□□□□□ -1.76
CLK4-207ENST00000520909 AGPAT3Q9NRZ7 376 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 DDX43Q9NXZ2 648 aaKnown RBP4.04□□□□□ -1.76
CLK4-207ENST00000520909 LIMA1Q9UHB6 759 aaKnown RBP4.04□□□□□ -1.76
CLK4-207ENST00000520909 EXOC7Q9UPT5 735 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 TRAF3IP3Q9Y228 551 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 RCE1Q9Y256 329 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 ZNF711Q9Y462 761 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 SMAD5-AS1Q9Y6J3 95 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 ZNF236Q9UL36 1845 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 MYH9P35579 1960 aaKnown RBP4.04□□□□□ -1.76
CLK4-207ENST00000520909 ADGRA3Q8IWK6 1321 aa4.04□□□□□ -1.76
CLK4-207ENST00000520909 LRRC37A2A6NM11 1700 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 GOLGA8IPA6NC78 632 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 GOLGA8JA6NMD2 632 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 LGALS16A8MUM7 142 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 ANKRD63C9JTQ0 380 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 HAS3O00219 553 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 TIPRLO75663 272 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 IL1AP01583 271 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 ASGR1P07306 291 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 AVPR2P30518 371 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 ABCD1P33897 745 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 TIMP3P35625 211 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 PSMC2P35998 433 aaKnown RBP4.03□□□□□ -1.76
CLK4-207ENST00000520909 MATR3P43243 847 aaKnown RBP eCLIP4.03□□□□□ -1.76
CLK4-207ENST00000520909 CASP4P49662 377 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 LIG4P49917 911 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 SNRPFP62306 86 aaKnown RBP4.03□□□□□ -1.76
CLK4-207ENST00000520909 UBXN1Q04323 297 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 MARCH8Q5T0T0 291 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 ARMCX5Q6P1M9 558 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 APTXQ7Z2E3 356 aaKnown RBP4.03□□□□□ -1.76
CLK4-207ENST00000520909 ZC3H3Q8IXZ2 948 aaKnown RBP4.03□□□□□ -1.76
CLK4-207ENST00000520909 SYTL1Q8IYJ3 562 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 FAM186BQ8IYM0 893 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 KLHDC9Q8NEP7 349 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 OR4N2Q8NGD1 307 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 POMGNT1Q8WZA1 660 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 TRIM44Q96DX7 344 aaPredicted RBP4.03□□□□□ -1.76
CLK4-207ENST00000520909 C3orf30Q96M34 536 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 CCDC138Q96M89 665 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 CBWD1Q9BRT8 395 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 TCHPQ9BT92 498 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 RBM4Q9BWF3 364 aaKnown RBP4.03□□□□□ -1.76
CLK4-207ENST00000520909 C2orf40Q9H1Z8 148 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 PTPRHQ9HD43 1115 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 WDR6Q9NNW5 1121 aaKnown RBP4.03□□□□□ -1.76
CLK4-207ENST00000520909 DMAC2Q9NW81 257 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 ZNF224Q9NZL3 707 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 FNIP2Q9P278 1114 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 CGNQ9P2M7 1197 aaKnown RBP4.03□□□□□ -1.76
CLK4-207ENST00000520909 HDAC6Q9UBN7 1215 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 ARMCX3Q9UH62 379 aaPredicted RBP4.03□□□□□ -1.76
CLK4-207ENST00000520909 GINS2Q9Y248 185 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 NRCAMQ92823 1304 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 ZSWIM8A7E2V4 1837 aa4.03□□□□□ -1.76
CLK4-207ENST00000520909 CPED1A4D0V7 1026 aa4.02□□□□□ -1.77
CLK4-207ENST00000520909 OR6C68A6NDL8 312 aa4.02□□□□□ -1.77
CLK4-207ENST00000520909 AQP12BA6NM10 295 aa4.02□□□□□ -1.77
CLK4-207ENST00000520909 KBTBD13C9JR72 458 aa4.02□□□□□ -1.77
CLK4-207ENST00000520909 ACKR2O00590 384 aa4.02□□□□□ -1.77
CLK4-207ENST00000520909 CSDE1O75534 798 aaKnown RBP4.02□□□□□ -1.77
CLK4-207ENST00000520909 CABYRO75952 493 aa4.02□□□□□ -1.77
CLK4-207ENST00000520909 AKAP3O75969 853 aa4.02□□□□□ -1.77
CLK4-207ENST00000520909 CCL5P13501 91 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms