RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 CMAHPQ9Y471 501 aa3.56□□□□□ -1.84
HDAC2-208ENST00000520746 USP16Q9Y5T5 823 aa3.56□□□□□ -1.84
HDAC2-208ENST00000520746 UBR3Q6ZT12 1888 aa3.56□□□□□ -1.84
HDAC2-208ENST00000520746 USP54Q70EL1 1684 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 KDM6AO15550 1401 aaPredicted RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 IGHV4OR15-8A0A075B7B6 117 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 A0A1W2PQ09 198 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 AGAP14A8MT82 685 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 B4DLN1 442 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 FAM90A26D6RGX4 464 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 SMAD9O15198 467 aaKnown RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 PLPP2O43688 288 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 GJB3O75712 270 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 SNRNP70P08621 437 aaKnown RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 HSPA5P11021 654 aaKnown RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 MYL6BP14649 208 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 UGT1A1P22309 533 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 PON1P27169 355 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 HOXA13P31271 388 aaPredicted RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 GPR143P51810 404 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 MRPL12P52815 198 aaKnown RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 SNX16P57768 344 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 ISL1P61371 349 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 RELQ04864 619 aaPredicted RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 ZBTB17Q13105 803 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 PRKG2Q13237 762 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 CCDC96Q2M329 555 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 MYLK3Q32MK0 819 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 RAB41Q5JT25 222 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 IRAK1BP1Q5VVH5 260 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 CST9Q5W186 159 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 TRNP1Q6NT89 227 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 ZNF449Q6P9G9 518 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 PAPD4Q6PIY7 484 aaKnown RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 UNQ6126/PRO20091Q6UXV3 157 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 MAP7D3Q8IWC1 876 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 C1orf87Q8N0U7 546 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 TAGAPQ8N103 731 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 RASGEF1CQ8N431 466 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 RFLNBQ8N5W9 214 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 THAP6Q8TBB0 222 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 UTP15Q8TED0 518 aaKnown RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 TRPC4APQ8TEL6 797 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 SLC44A1Q8WWI5 657 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 PIGTQ969N2 578 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 DCPSQ96C86 337 aaKnown RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 NSUN4Q96CB9 384 aaKnown RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 CFAP53Q96M91 514 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 IL17FQ96PD4 163 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 PKP4Q99569 1192 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 TMEM39BQ9GZU3 492 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 TMEM30AQ9NV96 361 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 PAG1Q9NWQ8 432 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 SUCLA2Q9P2R7 463 aaPredicted RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 DBNLQ9UJU6 430 aaKnown RBP3.55□□□□□ -1.84
HDAC2-208ENST00000520746 POU2F3Q9UKI9 436 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 MMP24Q9Y5R2 645 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 TAF1LQ8IZX4 1826 aa3.55□□□□□ -1.84
HDAC2-208ENST00000520746 HEG1Q9ULI3 1381 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 ITGB4P16144 1822 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 LILRA5A6NI73 299 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 CDRT15L2A8MXV6 281 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 HMGB1P1B2RPK0 211 aaPredicted RBP3.54□□□□□ -1.84
HDAC2-208ENST00000520746 MAP2K7O14733 419 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 BUB3O43684 328 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 CSH1P0DML2 217 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 CSH2P0DML3 217 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 CDH1P12830 882 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 PORP16435 677 aaPredicted RBP3.54□□□□□ -1.84
HDAC2-208ENST00000520746 ITGA2P17301 1181 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 ACTN2P35609 894 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 IL15P40933 162 aaPredicted RBP3.54□□□□□ -1.84
HDAC2-208ENST00000520746 GMPSP49915 693 aaPredicted RBP3.54□□□□□ -1.84
HDAC2-208ENST00000520746 MFAP4P55083 255 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 COG7P83436 770 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 CXCL9Q07325 125 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 ACVR2BQ13705 512 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 TMEM35AQ53FP2 167 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 KRTCAP3Q53RY4 240 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 PLEKHS1Q5SXH7 462 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 CEP85LQ5SZL2 805 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 RARS2Q5T160 578 aaKnown RBP3.54□□□□□ -1.84
HDAC2-208ENST00000520746 LCN10Q6JVE6 187 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 GFRALQ6UXV0 394 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 TUBA1AQ71U36 451 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 MCM10Q7L590 875 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 PPP1R42Q7Z4L9 355 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 TMEM219Q86XT9 240 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 KMT5CQ86Y97 462 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 ARID3BQ8IVW6 561 aaPredicted RBP3.54□□□□□ -1.84
HDAC2-208ENST00000520746 SCYL3Q8IZE3 742 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 EMC1Q8N766 993 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 BBS10Q8TAM1 723 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 SPATA20Q8TB22 786 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 SECTM1Q8WVN6 248 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 TUBA1CQ9BQE3 449 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 C1QTNF1Q9BXJ1 281 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 CSTL1Q9H114 145 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 CCDC68Q9H2F9 335 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 HRH4Q9H3N8 390 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms