RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 API5Q9BZZ5 524 aaKnown RBP3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 CSTL1Q9H114 145 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 LRMDAQ9H2I8 198 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 DCTPP1Q9H773 170 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 GIMAP4Q9NUV9 329 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 PAG1Q9NWQ8 432 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ARHGEF38Q9NXL2 777 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 AMACRQ9UHK6 382 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 TNNQ9UQP3 1299 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 DDX49Q9Y6V7 483 aaKnown RBP3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 TMEM131LA2VDJ0 1609 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 CAMSAP1Q5T5Y3 1602 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ALKQ9UM73 1620 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 TECPR2O15040 1411 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 EDC4Q6P2E9 1401 aaKnown RBP3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 CLTCQ00610 1675 aaKnown RBP3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 QRICH2Q9H0J4 1663 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ABCC4O15439 1325 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 PASKQ96RG2 1323 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 A2ML1A8K2U0 1454 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 KNDC1Q76NI1 1749 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 KIAA0232Q92628 1395 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 A0A1W2PR77 199 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 OR2A25A4D2G3 310 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 PRSS47A8MTI9 375 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 J3QR06 171 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 EIF3DO15371 548 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 NDUFS4O43181 175 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 PAPSS1O43252 624 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 HTATSF1O43719 755 aaKnown RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 AMD1P17707 334 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 GM2AP17900 193 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 NR2F2P24468 414 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 AHRP35869 848 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 ARCN1P48444 511 aaKnown RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 HOXA1P49639 335 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 ARSEP51690 589 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 SNX16P57768 344 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 ISL1P61371 349 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 NUCB2P80303 420 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 COG7P83436 770 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 STK4Q13043 487 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZRSR1Q15695 479 aaKnown RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 CCDC96Q2M329 555 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 RAB6CQ53S08 254 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 OR7E24Q6IFN5 339 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 CAVIN1Q6NZI2 390 aaKnown RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 CLEC4GQ6UXB4 293 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF534Q76KX8 674 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF771Q7L3S4 317 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 CEP97Q8IW35 865 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 KRT222Q8N1A0 295 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 C1orf52Q8N6N3 182 aaKnown RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 FAM184AQ8NB25 1140 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 ABHD8Q96I13 439 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 CEP295NLQ96MC4 621 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 MYCBPQ99417 103 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 GFI1Q99684 422 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 NUDT16L1Q9BRJ7 211 aaKnown RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 KIFC3Q9BVG8 833 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 RTN4RQ9BZR6 473 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 RAB6CQ9H0N0 254 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 DNAJC18Q9H819 358 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 PLSCR4Q9NRQ2 329 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 ABCF3Q9NUQ8 709 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 DONSONQ9NYP3 566 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 SWAP70Q9UH65 585 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 TSPYL4Q9UJ04 414 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 PYCARDQ9ULZ3 195 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 PROCRQ9UNN8 238 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 YIPF1Q9Y548 306 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 SNX8Q9Y5X2 465 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 PTCH1Q13635 1447 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 SOS1Q07889 1333 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 SETD1AO15047 1707 aaKnown RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 ARHGEF28Q8N1W1 1705 aaKnown RBP3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 SIGLEC1Q9BZZ2 1709 aa3.16□□□□□ -1.9
HMGB1P41-201ENST00000520234 PLEKHG2Q9H7P9 1386 aa3.15□□□□□ -1.9
HMGB1P41-201ENST00000520234 LNP1A1A4G5 178 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SYCE3A1L190 88 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 CTAGE9A4FU28 777 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 C16orf97H3BN30 126 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 TMEM189-UBE2V1I3L0A0 370 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 DVL1O14640 695 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SYNGR3O43761 229 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 AVILO75366 819 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 RPS6KA5O75582 802 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 RSL1D1O76021 490 aaKnown RBP3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 PDE9AO76083 593 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 MBD3O95983 291 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 CTAGE8P0CG41 777 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 CETPP11597 493 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 SELLP14151 372 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 MMP9P14780 707 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 PRLRP16471 622 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 PRKAR2BP31323 418 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 CASQ1P31415 396 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 ACSL1P33121 698 aa3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 EIF2DP41214 584 aaKnown RBP3.15□□□□□ -1.91
HMGB1P41-201ENST00000520234 NRIP1P48552 1158 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms