RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SRRDQ9UH36 339 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CHORDC1Q9UHD1 332 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 KIF25Q9UIL4 384 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 AGO1Q9UL18 857 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 CRYL1Q9Y2S2 319 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TNPO3Q9Y5L0 923 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 TAF6LQ9Y6J9 622 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 DEPDC5O75140 1603 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 RAPGEF6Q8TEU7 1601 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 PARP4Q9UKK3 1724 aaKnown RBP4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 KIF13AQ9H1H9 1805 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 MYO5BQ9ULV0 1848 aa4.74□□□□□ -1.65
HMGB1P19-201ENST00000517578 NFASCO94856 1347 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PHRF1Q9P1Y6 1649 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 XRN1Q8IZH2 1706 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 RNF103-CHMP3A0A140T963 221 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 E2F8A0AVK6 867 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 WTIPA6NIX2 430 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM210A6NLX4 147 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 RHPN2P1A8MT19 583 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PRSS47A8MTI9 375 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MPTX1A8MV57 137 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PRR5-ARHGAP8B1AHC4 643 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TARM1B6A8C7 271 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PRRT4C9JH25 899 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 RTCAO00442 366 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 COPEO14579 308 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC30A4O14863 429 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SYN3O14994 580 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SGCEO43556 437 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 AVILO75366 819 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 STX11O75558 287 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 RFPL3O75679 317 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 GOT2P00505 430 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 FGRP09769 529 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 LTA4HP09960 611 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZDHHC11BP0C7U3 371 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 RRASP10301 218 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 HLA-EP13747 358 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ANXA8P13928 327 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SELLP14151 372 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC2A4P14672 509 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 DARSP14868 501 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 HOXB6P17509 224 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ALOX12P18054 663 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 GJC1P36383 396 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MCAMP43121 646 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CPA2P48052 419 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 RGS19P49795 217 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 LIG4P49917 911 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ITGA8P53708 1063 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 AQP5P55064 265 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDH6P55285 790 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CD81P60033 236 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARHGAP8P85298 464 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC25A3Q00325 362 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDKL1Q00532 357 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 DEFA6Q01524 100 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 IL1RL1Q01638 556 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ROR1Q01973 937 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MVKQ03426 396 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MGAT3Q09327 533 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 OVGP1Q12889 678 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ABRQ12979 859 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRAF3Q13114 568 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 DMP1Q13316 513 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAB21L1Q13394 359 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ORC2Q13416 577 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ALCAMQ13740 583 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MXD4Q14582 209 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CBX2Q14781 532 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PSMD5Q16401 504 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 AANATQ16613 207 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MICAQ29983 383 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PARP15Q460N3 678 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC36A3Q495N2 470 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCDC157Q569K6 752 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TTC38Q5R3I4 469 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PDZK1Q5T2W1 519 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ANXA8L1Q5VT79 327 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TTC23Q5W5X9 447 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 HLA-DQA1Q5Y7H0 255 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PTRHD1Q6GMV3 140 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TCEAL6Q6IPX3 200 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 XRRA1Q6P2D8 792 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM81Q6P7N7 255 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CNKSR3Q6P9H4 555 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ETV3LQ6ZN32 361 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TPGS1Q6ZTW0 290 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SSX9Q7RTT3 188 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SNX20Q7Z614 316 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF227Q86WZ6 799 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PPIL6Q8IXY8 311 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 NAGSQ8N159 534 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PDIK1LQ8N165 341 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CARFQ8N187 725 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CPA6Q8N4T0 437 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM199Q8N511 208 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PCDH20Q8N6Y1 951 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms