RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 PCDH20Q8N6Y1 951 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 ARIH2OSQ8N7S6 290 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 C4orf32Q8N8J7 132 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 SYT14Q8NB59 555 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 GLIS1Q8NBF1 620 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 OR52B6Q8NGF0 335 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 ATL2Q8NHH9 583 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 SPPL3Q8TCT6 385 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 DIS3LQ8TF46 1054 aaKnown RBP-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 HPS3Q969F9 1004 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 CNRIP1Q96F85 164 aaPredicted RBP-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 GRAMD2BQ96HH9 432 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 TWNKQ96RR1 684 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 MAP3K3Q99759 626 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 NUDT22Q9BRQ3 303 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 HERC2P3Q9BVR0 1158 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 COLEC11Q9BWP8 271 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 B3GNT5Q9BYG0 378 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 NUF2Q9BZD4 464 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 SEBOXQ9HB31 216 aaPredicted RBP-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 OLFML3Q9NRN5 406 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 BAIAP2L1Q9UHR4 511 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 AUP1Q9Y679 476 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 A3GALT2U3KPV4 340 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 ZNF407Q9C0G0 2248 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 MUC12Q9UKN1 5478 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 SHANK1Q9Y566 2161 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 LAMB2P55268 1798 aa-0.32□□□□□ -2.46
SNORA40.17-201ENST00000517256 COL27A1Q8IZC6 1860 aaPredicted RBP-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 CACNA1DQ01668 2161 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 IGKV2-24A0A0C4DH68 120 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 TEX13DA0A0J9YY54 714 aaPredicted RBP-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 FAM231BA6NCW3 169 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 FRG2CA6NGY1 282 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 ZSCAN5BA6NJL1 495 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 A8MV72 311 aaPredicted RBP-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 ATP6V0E1O15342 81 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 SPINT2O43291 252 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 N4BP1O75113 896 aaKnown RBP-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 ZNF253O75346 499 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 NDST3O95803 873 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 FTCDO95954 541 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 ADAP00813 363 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 IGHG3P01860 377 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 AOC1P19801 751 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 GABRB3P28472 473 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 CNGA1P29973 690 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 HLA-FP30511 346 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 AKT1P31749 480 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 RPS6KA3P51812 740 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 THOP1P52888 689 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 CSNK2A1P68400 391 aaPredicted RBP-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 DHODHQ02127 395 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 ITPK1Q13572 414 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 ITGA7Q13683 1181 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 KIAA0040Q15053 153 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 LTB4RQ15722 352 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 SLC5A9Q2M3M2 681 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 C2orf68Q2NKX9 166 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 TMEM44Q2T9K0 475 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 AP5B1Q2VPB7 878 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 LRRC24Q50LG9 513 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 RAB6CQ53S08 254 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 RUNDC3AQ59EK9 446 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 SLC10A5Q5PT55 438 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 SYDE2Q5VT97 1194 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 CYB5R2Q6BCY4 276 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 CGB2Q6NT52 195 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 PPP4R4Q6NUP7 873 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 BRAT1Q6PJG6 821 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 Q75L30 129 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 EPM2AIP1Q7L775 607 aaPredicted RBP-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 FBXO16Q8IX29 292 aaPredicted RBP-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 SLC35F3Q8IY50 421 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 CEND1Q8N111 149 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 BEST3Q8N1M1 668 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 ZNF709Q8N972 641 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 USP38Q8NB14 1042 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 SETD9Q8NE22 299 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 CSNK2A3Q8NEV1 391 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 WDR60Q8WVS4 1066 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 ITLN1Q8WWA0 313 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 PSPC1Q8WXF1 523 aaKnown RBP-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 SNAPC3Q92966 411 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 TRIM63Q969Q1 353 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 SNX22Q96L94 193 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 FAM218AQ96MZ4 157 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 MYD88Q99836 296 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 RAB6CQ9H0N0 254 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 PCDHAC1Q9H158 963 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 SMYD2Q9NRG4 433 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 ATP8A2Q9NTI2 1148 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 MARCOQ9UEW3 520 aaPredicted RBP-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 HACL1Q9UJ83 578 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 CNPY2Q9Y2B0 182 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 NFE2L3Q9Y4A8 694 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 WSB1Q9Y6I7 421 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 STON1Q9Y6Q2 735 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 MAST4O15021 2626 aa-0.33□□□□□ -2.46
SNORA40.17-201ENST00000517256 COL7A1Q02388 2944 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms