RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 PRKG2Q13237 762 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SEPT6Q14141 434 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GRB7Q14451 532 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PPP2R5EQ16537 467 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DEFB110Q30KQ9 67 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 LDLRAP1Q5SW96 308 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PID1Q7Z2X4 250 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GLT6D1Q7Z4J2 308 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PPP1R32Q7Z5V6 425 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SYVN1Q86TM6 617 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SYTL1Q8IYJ3 562 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GLIS1Q8NBF1 620 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 OR52E1Q8NGJ3 308 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CCDC110Q8TBZ0 833 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 BRSK1Q8TDC3 778 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ALG3Q92685 438 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 LRFN5Q96NI6 719 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MENTQ9BUN1 341 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 NLNQ9BYT8 704 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TRABDQ9H4I3 376 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ZNF552Q9H707 407 aaPredicted RBP8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ASB8Q9H765 288 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PDE7BQ9NP56 450 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 RAD18Q9NS91 495 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ASF1BQ9NVP2 202 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ICKQ9UPZ9 632 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PCDHB3Q9Y5E6 796 aa8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DNMT3AQ9Y6K1 912 aaPredicted RBP8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SNRNP200O75643 2136 aaKnown RBP8.02□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ITPR3Q14573 2671 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ZNF469Q96JG9 3925 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 UBA6A0AVT1 1052 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TMEM150CB9EJG8 249 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 BHMG1C9JSJ3 638 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PPP1R12AO14974 1030 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 STX7O15400 261 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ZNF749O43361 778 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 AKR1B10O60218 316 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TMEM63AO94886 807 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 METTL18O95568 372 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 RAB40ALP0C0E4 278 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ACADLP28330 430 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DCTP40126 519 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 NR2C2P49116 596 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PRLHRP49683 370 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PGDP52209 483 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ACY1Q03154 408 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SRSF11Q05519 484 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 BOP1Q14137 746 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SLC9A5Q14940 896 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PLCL1Q15111 1095 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 C1orf189Q5VU69 101 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 KCTD11Q693B1 232 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 BBS12Q6ZW61 710 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CUZD1Q86UP6 607 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 KMT5CQ86Y97 462 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TMEM126BQ8IUX1 230 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 VRK3Q8IV63 474 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 KATNAL2Q8IYT4 538 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 NXPE1Q8N323 547 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CISD2Q8N5K1 135 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TC2NQ8N9U0 490 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 OR5AR1Q8NGP9 310 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ACTL9Q8TC94 416 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 LKAAEAR1Q8TD35 194 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SSC4DQ8WTU2 575 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 DNAJC1Q96KC8 554 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 ZNF830Q96NB3 372 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GBP5Q96PP8 586 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 OR2A14Q96R47 310 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 SMAD5Q99717 465 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GBA3Q9H227 469 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 COG4Q9H9E3 785 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 LRRC4CQ9HCJ2 640 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CASS4Q9NQ75 786 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 LATS2Q9NRM7 1088 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 KLHL8Q9P2G9 620 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CIDEBQ9UHD4 219 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PLAGL1Q9UM63 463 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CDYLQ9Y232 598 aa8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 R3HDM2Q9Y2K5 976 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CROCCQ5TZA2 2017 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CCDC78A2IDD5 438 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 CCDC66A2RUB6 948 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 OR1I1O60431 355 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 KCNJ13O60928 360 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 AGFG2O95081 481 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MT-ND3P03897 115 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 HLA-DPA1P20036 260 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 MSH3P20585 1137 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 PSMA3P25788 255 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GRIA1P42261 906 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 HALP42357 657 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 VAV2P52735 878 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 EFNA3P52797 238 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 HADHBP55084 474 aaKnown RBP8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 GDF10P55107 478 aa8□□□□□ -1.13
SCARNA20.3-201ENST00000516913 OTUD4Q01804 1114 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms