RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 ZNF71Q9NQZ8 489 aaPredicted RBP3.49□□□□□ -1.85
LINC01088-211ENST00000515597 ECHDC1Q9NTX5 307 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 CACNG5Q9UF02 275 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 STK36Q9NRP7 1315 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 CD109Q6YHK3 1445 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 PTGES3LE9PB15 166 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 ARHGEF9O43307 516 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 EML2O95834 649 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 RB1P06400 928 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 CKMT2P17540 419 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 CBLP22681 906 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 SP100P23497 879 aaPredicted RBP3.48□□□□□ -1.85
LINC01088-211ENST00000515597 IRX6P78412 446 aaPredicted RBP3.48□□□□□ -1.85
LINC01088-211ENST00000515597 AIMP2Q13155 320 aaKnown RBP3.48□□□□□ -1.85
LINC01088-211ENST00000515597 ASTE1Q2TB18 679 aaPredicted RBP3.48□□□□□ -1.85
LINC01088-211ENST00000515597 ALS2CLQ60I27 953 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 TMEM198Q66K66 360 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 DENND5BQ6ZUT9 1274 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 CHST9Q7L1S5 443 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 ISCA2Q86U28 154 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 ARID3BQ8IVW6 561 aaPredicted RBP3.48□□□□□ -1.85
LINC01088-211ENST00000515597 RPAP2Q8IXW5 612 aaPredicted RBP3.48□□□□□ -1.85
LINC01088-211ENST00000515597 ADGRF2Q8IZF7 708 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 SEMA4DQ92854 862 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 LINC00479Q96M42 142 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 DACH2Q96NX9 599 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 RTP3Q9BQQ7 232 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 RHNO1Q9BSD3 238 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 MAK16Q9BXY0 300 aaKnown RBP3.48□□□□□ -1.85
LINC01088-211ENST00000515597 WDR13Q9H1Z4 485 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 PLK3Q9H4B4 646 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 PELI2Q9HAT8 420 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 MBNL1Q9NR56 388 aaKnown RBP3.48□□□□□ -1.85
LINC01088-211ENST00000515597 INTS10Q9NVR2 710 aaKnown RBP3.48□□□□□ -1.85
LINC01088-211ENST00000515597 PTTG2Q9NZH5 202 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 TMEM181Q9P2C4 612 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 RASAL2Q9UJF2 1139 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 PYGO1Q9Y3Y4 419 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 CMAHPQ9Y471 501 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 KIAA0586Q9BVV6 1533 aa3.48□□□□□ -1.85
LINC01088-211ENST00000515597 UHRF1BP1LA0JNW5 1464 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 FSD2A1L4K1 749 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 MEIOCA2RUB1 952 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 SLCO1B7G3V0H7 640 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 PLOD2O00469 737 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 PTP4A3O75365 173 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 GH2P01242 217 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 TM4SF1P30408 202 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 PSMB10P40306 273 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 WNT5AP41221 380 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 MAPRE1Q15691 268 aaKnown RBP3.47□□□□□ -1.85
LINC01088-211ENST00000515597 FFAR4Q5NUL3 377 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 HYIQ5T013 277 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 FAAP20Q6NZ36 180 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 CRYBG2Q8N1P7 616 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 POM121L2Q96KW2 1035 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 GAD1Q99259 594 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 CHCHD6Q9BRQ6 235 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 MAF1Q9H063 256 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 TBC1D22BQ9NU19 505 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 MIOSQ9NXC5 875 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 BARHL2Q9NY43 387 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 FBXL17Q9UF56 701 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 NENFQ9UMX5 172 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 MRPS28Q9Y2Q9 187 aaKnown RBP3.47□□□□□ -1.85
LINC01088-211ENST00000515597 AGRNO00468 2067 aa3.47□□□□□ -1.85
LINC01088-211ENST00000515597 SETBP1Q9Y6X0 1596 aa3.46□□□□□ -1.85
LINC01088-211ENST00000515597 ZCCHC11Q5TAX3 1644 aaKnown RBP3.46□□□□□ -1.86
LINC01088-211ENST00000515597 A0A0J9YWU9 116 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 CDRT15L2A8MXV6 281 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 SH2B2O14492 632 aaPredicted RBP3.46□□□□□ -1.86
LINC01088-211ENST00000515597 VILLO15195 856 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 TPPPO94811 219 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 OR2C1O95371 312 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 H1F0P07305 194 aaKnown RBP3.46□□□□□ -1.86
LINC01088-211ENST00000515597 FRMD6-AS1P0C7T7 363 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 GABRB1P18505 474 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 PON1P27169 355 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 MAPK4P31152 587 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 CSRP3P50461 194 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 KCNJ10P78508 379 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 SPINK14Q6IE38 97 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 KLC3Q6P597 504 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 TRIM15Q9C019 465 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 SLA2Q9H6Q3 261 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 OLFML3Q9NRN5 406 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 BLOC1S4Q9NUP1 217 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 ATAD3AQ9NVI7 634 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 SLC7A7Q9UM01 511 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 RABGAP1Q9Y3P9 1069 aa3.46□□□□□ -1.86
LINC01088-211ENST00000515597 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.46□□□□□ -1.86
LINC01088-211ENST00000515597 UACAQ9BZF9 1416 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 NOTCH2Q04721 2471 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 IGKV6D-41A0A0C4DH26 115 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 ANKRD18BA2A2Z9 1011 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 OR6C76A6NM76 312 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 TSPAN9O75954 239 aa3.45□□□□□ -1.86
LINC01088-211ENST00000515597 ZFAND5O76080 213 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms