RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 LMNTD1Q8N9Z9 388 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 OR5AR1Q8NGP9 310 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 GABPB2Q8TAK5 448 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 AENQ8WTP8 325 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 UBLCP1Q8WVY7 318 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 KCNJ9Q92806 393 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 ZBTB9Q96C00 473 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 UCN2Q96RP3 112 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 RBBP8Q99708 897 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 CPNE1Q99829 537 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 UNKQ9C0B0 810 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 TSPYL1Q9H0U9 437 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 RHOJQ9H4E5 214 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 ACSS3Q9H6R3 686 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 TXNDC16Q9P2K2 825 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 TRMT6Q9UJA5 497 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 ATXN7L1Q9ULK2 861 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 MTO1Q9Y2Z2 717 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 ASXL3Q9C0F0 2248 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 RP1P56715 2156 aa9.57□□□□□ -0.88
TOPBP1-209ENST00000513818 SPTBN4Q9H254 2564 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 A0A087WUV0 522 aaPredicted RBP9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 KIR2DS5A0A0G2JLQ3 304 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 A0A0G2JNG1 304 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 F8W8V4 182 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 KIR2DS3K7RE56 304 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 IFRD1O00458 451 aaPredicted RBP9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 KCNJ13O60928 360 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 TOP3BO95985 862 aaKnown RBP9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 SHBGP04278 402 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 RPLP0P05388 317 aaKnown RBP9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 CEACAM1P13688 526 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC2A4P14672 509 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 GLB1P16278 677 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 TYRP1P17643 537 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 ACP1P24666 158 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 ACADLP28330 430 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 ALDH4A1P30038 563 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 CSF2RBP32927 897 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 ID4P47928 161 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 LIMK2P53671 638 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 TAS2R39P59534 338 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 CCL7P80098 99 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 VAC14Q08AM6 782 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 GPR18Q14330 331 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 KIR2DS5Q14953 304 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 CCSMST1Q4G0I0 132 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 PLEKHS1Q5SXH7 462 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 FAM45BPQ6NSW5 357 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 WDR93Q6P2C0 686 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 PAQR3Q6TCH7 311 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 TMEM207Q6UWW9 146 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 WASH2PQ6VEQ5 465 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 TRMT10CQ7L0Y3 403 aaKnown RBP9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 SPRED1Q7Z699 444 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 CMC1Q7Z7K0 106 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 GALNT7Q86SF2 657 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 GLRX5Q86SX6 157 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC9B2Q86UD5 537 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 CEP97Q8IW35 865 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 FAM45AQ8TCE6 357 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 TFGQ92734 400 aaPredicted RBP9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 NAT6Q93015 286 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 LINGO1Q96FE5 620 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 FERD3LQ96RJ6 166 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 CYTH2Q99418 400 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 PAFAH2Q99487 392 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC38A3Q99624 504 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 MCMBPQ9BTE3 642 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 WASH6PQ9NQA3 447 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 POT1Q9NUX5 634 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 NSMCE4AQ9NXX6 385 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 IKZF3Q9UKT9 509 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 ACSL5Q9ULC5 683 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC39A10Q9ULF5 831 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 ASF1AQ9Y294 204 aa9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 TDRKHQ9Y2W6 561 aaKnown RBP9.56□□□□□ -0.88
TOPBP1-209ENST00000513818 EXOC1LA0A1B0GW35 172 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 A0A1W2PQM1 296 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 FAM149AA5PLN7 773 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 SMIM23A6NLE4 172 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 OR5K4A6NMS3 321 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 B4GAT1O43505 415 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 NUDT21O43809 227 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 ITGA2BP08514 1039 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 ABHD2P08910 425 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 GSTM1P09488 218 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 MPSTP25325 297 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 GCAP28676 217 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 SOX11P35716 441 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 HSD17B3P37058 310 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 FASLGP48023 281 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 DUSP3P51452 185 aaPredicted RBP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 PPP1CAP62136 330 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 GSTM4Q03013 218 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 RPA4Q13156 261 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms