RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PPIDQ08752 370 aaKnown RBP10.58□□□□□ -0.72
DDX41-216ENST00000513562 PCSK7Q16549 785 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 LONRF2Q1L5Z9 754 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 VWA2Q5GFL6 755 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 FNBP1LQ5T0N5 605 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 GPRC6AQ5T6X5 926 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 RPTNQ6XPR3 784 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 NT5DC3Q86UY8 548 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 PQLC3Q8N755 202 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 OR2L2Q8NH16 312 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 LCN9Q8WX39 176 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 FAF2Q96CS3 445 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 BTBD6Q96KE9 485 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 AP1M1Q9BXS5 423 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 KLHL25Q9H0H3 589 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 ISCUQ9H1K1 167 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 SLC25A51Q9H1U9 297 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 EPS8L2Q9H6S3 715 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 UGT1A7Q9HAW7 530 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 UGT1A10Q9HAW8 530 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 UGT1A8Q9HAW9 530 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 FANCLQ9NW38 375 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 SMOXQ9NWM0 555 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 HEBP2Q9Y5Z4 205 aa10.58□□□□□ -0.72
DDX41-216ENST00000513562 CCDC78A2IDD5 438 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 LRRC10BA6NIK2 292 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 LRRC53A6NM62 1247 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 GAPDHSO14556 408 aaPredicted RBP10.57□□□□□ -0.72
DDX41-216ENST00000513562 ALOX12BO75342 701 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 MT-CYBP00156 380 aaPredicted RBP10.57□□□□□ -0.72
DDX41-216ENST00000513562 CAPN3P20807 821 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 MMP11P24347 488 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 PRKCIP41743 596 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 KRTAP10-9P60411 292 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 SLC9A5Q14940 896 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 PRKD1Q15139 912 aaPredicted RBP10.57□□□□□ -0.72
DDX41-216ENST00000513562 ASIC2Q16515 512 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 PPP2R5EQ16537 467 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 NKAIN1Q4KMZ8 207 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 ATP13A4Q4VNC1 1196 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 FAM182AQ5T1J6 154 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 IRAK1BP1Q5VVH5 260 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 E4F1Q66K89 784 aaPredicted RBP10.57□□□□□ -0.72
DDX41-216ENST00000513562 MTFR2Q6P444 385 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 FAM151BQ6UXP7 276 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 APTXQ7Z2E3 356 aaKnown RBP10.57□□□□□ -0.72
DDX41-216ENST00000513562 CDH24Q86UP0 819 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 ANKRD20A12PQ8NF67 263 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 NR4A3Q92570 626 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 LINC00615Q96LM1 132 aaPredicted RBP10.57□□□□□ -0.72
DDX41-216ENST00000513562 CEP41Q9BYV8 373 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 LHPPQ9H008 270 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 TRABDQ9H4I3 376 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 FAM60AQ9NP50 221 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.57□□□□□ -0.72
DDX41-216ENST00000513562 IL17CQ9P0M4 197 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 DHCR7Q9UBM7 475 aaKnown RBP10.57□□□□□ -0.72
DDX41-216ENST00000513562 IP6K2Q9UHH9 426 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 ANAPC7Q9UJX3 599 aa10.57□□□□□ -0.72
DDX41-216ENST00000513562 TRGV8A0A0C4DH27 118 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 GLYATL1P3A0A0U1RQE8 302 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 C2orf74A8MZ97 194 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 SOCS6O14544 535 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 ZSCAN9O15535 394 aaPredicted RBP10.56□□□□□ -0.72
DDX41-216ENST00000513562 KCNN4O15554 427 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 HCRTR1O43613 425 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 PRICKLE3O43900 615 aaPredicted RBP10.56□□□□□ -0.72
DDX41-216ENST00000513562 DIAPH2O60879 1101 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 ATXN8OSP0DMR3 200 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 PYGMP11217 842 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 MSH3P20585 1137 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 GABRA4P48169 554 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 MFAP5Q13361 173 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 ITGA9Q13797 1035 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 KRT33BQ14525 404 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 GSE1Q14687 1217 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 PDK2Q15119 407 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 INAQ16352 499 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 HADHQ16836 314 aaKnown RBP10.56□□□□□ -0.72
DDX41-216ENST00000513562 DEFB110Q30KQ9 67 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 BCL7AQ4VC05 210 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 CCDC70Q6NSX1 233 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 DET1Q7L5Y6 550 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 LILRA3Q8N6C8 439 aaPredicted RBP10.56□□□□□ -0.72
DDX41-216ENST00000513562 C19orf47Q8N9M1 422 aaKnown RBP10.56□□□□□ -0.72
DDX41-216ENST00000513562 KCTD6Q8NC69 237 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 SPATA22Q8NHS9 363 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 N4BP2L2Q92802 583 aaPredicted RBP10.56□□□□□ -0.72
DDX41-216ENST00000513562 ZNF830Q96NB3 372 aaPredicted RBP10.56□□□□□ -0.72
DDX41-216ENST00000513562 TAAR6Q96RI8 345 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 NRTNQ99748 197 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 CCM2Q9BSQ5 444 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 CHRNA10Q9GZZ6 450 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 SPRTNQ9H040 489 aaPredicted RBP10.56□□□□□ -0.72
DDX41-216ENST00000513562 NUP62CLQ9H1M0 184 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 DEF6Q9H4E7 631 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 TFB2MQ9H5Q4 396 aaKnown RBP10.56□□□□□ -0.72
DDX41-216ENST00000513562 SLC22A11Q9NSA0 550 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 ACTR10Q9NZ32 417 aa10.56□□□□□ -0.72
DDX41-216ENST00000513562 FAM8A1Q9UBU6 413 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms