RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LUC7L3O95232 432 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 KIF20AO95235 890 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CBX6O95503 412 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 ASS1P00966 412 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 RNF224P0DH78 156 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 FGF3P11487 239 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CTSEP14091 401 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PRLRP16471 622 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 TSHRP16473 764 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CAPN3P20807 821 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PDCP20941 246 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 ADORA2BP29275 332 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 EPHB2P29323 1055 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 ECHS1P30084 290 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CHRNA3P32297 505 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 ETV5P41161 510 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 TSPAN7P41732 249 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 TKTL1P51854 596 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 HDAC4P56524 1084 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CLDN2P57739 230 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PFN3P60673 137 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 NUCB2P80303 420 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PPARDQ03181 441 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CYP24A1Q07973 514 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CDC20Q12834 499 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 SGCGQ13326 291 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 MTA1Q13330 715 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 DRAP1Q14919 205 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 DLG2Q15700 870 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 DEFB109BQ30KR1 87 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 ACCSLQ4AC99 568 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 ZRANB3Q5FWF4 1079 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 MS4A13Q5J8X5 152 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 EFHC1Q5JVL4 640 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CERCAMQ5T4B2 595 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 DCAF12Q5T6F0 453 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 FAXCQ5TGI0 409 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 BSPRYQ5W0U4 402 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 MSANTD2Q6P1R3 559 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 RFWD3Q6PCD5 774 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 ERN2Q76MJ5 926 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PTAR1Q7Z6K3 402 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 AMIGO2Q86SJ2 522 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PIGZQ86VD9 579 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 APCDD1Q8J025 514 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CARNMT1Q8N4J0 409 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 FAM184AQ8NB25 1140 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 ANKRD52Q8NB46 1076 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 NLGN4YQ8NFZ3 816 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 OR7D4Q8NG98 312 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 WFDC5Q8TCV5 224 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 NOC3LQ8WTT2 800 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 KLK6Q92876 244 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 HDAC10Q969S8 669 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 RAB7BQ96AH8 199 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CCDC127Q96BQ5 260 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CENPTQ96BT3 561 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 HSPBAP1Q96EW2 488 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PPP1R16AQ96I34 528 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PPP1R13BQ96KQ4 1090 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 KLF6Q99612 283 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 MRI1Q9BV20 369 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 EDEM3Q9BZQ6 932 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 LRRC27Q9C0I9 530 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CLPBQ9H078 707 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 SDCBP2Q9H190 292 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 SMYD3Q9H7B4 428 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 SYNDIG1Q9H7V2 258 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 MANSC1Q9H8J5 431 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 GPN2Q9H9Y4 310 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 MLXIPLQ9NP71 852 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 DYRK4Q9NR20 520 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 FAM49BQ9NUQ9 324 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 APOBEC3BQ9UH17 382 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 USP25Q9UHP3 1055 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 ZNF180Q9UJW8 692 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 POLHQ9Y253 713 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 SIK3Q9Y2K2 1263 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PCDHGA9Q9Y5G4 932 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 PCDHGA6Q9Y5G7 932 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 DNHD1Q96M86 4753 aa3.67□□□□□ -1.82
PDLIM5-218ENST00000513341 CXorf51AA0A1B0GTR3 108 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 GOLGA6L7A0A1B0GV03 622 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 A0A1W2PS29 197 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 KPNA3O00505 521 aaPredicted RBP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 CASC3O15234 703 aaKnown RBP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 INPP4BO15327 924 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 B4GAT1O43505 415 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 KRT86O43790 486 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 RAD1O60671 282 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 LRCH4O75427 683 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 SORBS2O94875 1100 aaKnown RBP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 IL33O95760 270 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 CCL4P13236 92 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 PRF1P14222 555 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 OAS2P29728 719 aaKnown RBP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 CSTF2P33240 577 aaKnown RBP eCLIP3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 PTPN7P35236 360 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 PTGER4P35408 488 aa3.66□□□□□ -1.82
PDLIM5-218ENST00000513341 SGSHP51688 502 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms