RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 EPOP01588 193 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 BPIP17213 487 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 RPL10P27635 214 aaKnown RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 HMGCLP35914 325 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 CAPZBP47756 277 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 SEPHS1P49903 392 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 GFERP55789 205 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 DYNLT1P63172 113 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 TMEM115Q12893 351 aaPredicted RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 CDK5R2Q13319 367 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 SEPT7Q16181 437 aaKnown RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 ASTE1Q2TB18 679 aaPredicted RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP46-208ENST00000512656 LACTB2Q53H82 288 aaPredicted RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 LDLRAP1Q5SW96 308 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 ZNF648Q5T619 568 aaPredicted RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 CACHD1Q5VU97 1274 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 IRGCQ6NXR0 463 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 AMZ2Q86W34 360 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 PPP1R3BQ86XI6 285 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 WFDC3Q8IUB2 231 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 POU5F2Q8N7G0 328 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 DTX3LQ8TDB6 740 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 TFB1MQ8WVM0 346 aaKnown RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 SEC14L1Q92503 715 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 UBXN4Q92575 508 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 TADA1Q96BN2 335 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 ZNF514Q96K75 400 aaPredicted RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 TEKT5Q96M29 485 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 FCRL4Q96PJ5 515 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 OR6C1Q96RD1 312 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 VAT1Q99536 393 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 FERMT1Q9BQL6 677 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 RAB33BQ9H082 229 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 PDE7BQ9NP56 450 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 SLC40A1Q9NP59 571 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 OGFRQ9NZT2 677 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 ZNF624Q9P2J8 865 aaPredicted RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 SLC23A2Q9UGH3 650 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 LNPEPQ9UIQ6 1025 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 PADI1Q9ULC6 663 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 INTUQ9ULD6 942 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 POLHQ9Y253 713 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 BSNQ9UPA5 3926 aa7.04□□□□□ -1.28
USP46-208ENST00000512656 ZFC3H1O60293 1989 aaKnown RBP7.04□□□□□ -1.28
USP46-208ENST00000512656 KLHL33A6NCF5 533 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 GOLGA6L3A6NEY3 463 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 C3orf70A6NLC5 250 aaPredicted RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 OR52A4PA6NMU1 304 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 PSTPIP1O43586 416 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 MTX2O75431 263 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 KATNA1O75449 491 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 KIAA0754O94854 1291 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 NDUFA10O95299 355 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 MT-CYBP00156 380 aaPredicted RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 PYGMP11217 842 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 FGF5P12034 268 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 TNNT1P13805 278 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 BRAFP15056 766 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 NELFEP18615 380 aaKnown RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 HLA-DPA1P20036 260 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 PTPN3P26045 913 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 OAS2P29728 719 aaKnown RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 GSTT1P30711 240 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 DLSTP36957 453 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 SPAM1P38567 509 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 DRG2P55039 364 aaKnown RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 WNT3AP56704 352 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 DMPKQ09013 629 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 KLRB1Q12918 225 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 ITGA9Q13797 1035 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 GPR18Q14330 331 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 PRKD1Q15139 912 aaPredicted RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 PPP2R5EQ16537 467 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 SKIDA1Q1XH10 827 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 ATP13A5Q4VNC0 1218 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 NPNTQ6UXI9 565 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 ZNF547Q8IVP9 402 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 SIDT2Q8NBJ9 832 aaKnown RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 SPATA22Q8NHS9 363 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 KLHL6Q8WZ60 621 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 P3H4Q92791 437 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 CD180Q99467 661 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 EPN3Q9H201 632 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 NHEJ1Q9H9Q4 299 aaPredicted RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 BPIFA1Q9NP55 256 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 ZNF71Q9NQZ8 489 aaPredicted RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 KLHL8Q9P2G9 620 aaPredicted RBP7.03□□□□□ -1.28
USP46-208ENST00000512656 CROTQ9UKG9 612 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 TRHDEQ9UKU6 1024 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 RARRES3Q9UL19 164 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 PKP3Q9Y446 797 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 PCDHGA6Q9Y5G7 932 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 SPO11Q9Y5K1 396 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 SLC30A1Q9Y6M5 507 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 UNC79Q9P2D8 2635 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 DOPEY2Q9Y3R5 2298 aa7.03□□□□□ -1.28
USP46-208ENST00000512656 GLYATL1P3A0A0U1RQE8 302 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 LOC285095A0A1B0GVY8 99 aa7.02□□□□□ -1.29
USP46-208ENST00000512656 PIPSLA2A3N6 862 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms