RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 LMAN1LQ9HAT1 526 aa6.17□□□□□ -1.42
TRAPPC11-209ENST00000512476 BARX1Q9HBU1 254 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC11-209ENST00000512476 PCDH9Q9HC56 1237 aa6.17□□□□□ -1.42
TRAPPC11-209ENST00000512476 ZFP14Q9HCL3 533 aa6.17□□□□□ -1.42
TRAPPC11-209ENST00000512476 CLEC5AQ9NY25 188 aa6.17□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC39A1Q9NY26 324 aa6.17□□□□□ -1.42
TRAPPC11-209ENST00000512476 KIF1AQ12756 1690 aa6.17□□□□□ -1.42
TRAPPC11-209ENST00000512476 MST1RQ04912 1400 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 FPGTO14772 594 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 HS6ST1O60243 411 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 NKX2-2O95096 273 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 MPIG6BO95866 241 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 LDLRP01130 860 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 STAG3L2P0CL84 134 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 NCF2P19878 526 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 THBS4P35443 961 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PREPP48147 710 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 GALK1P51570 392 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 SOX10P56693 466 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PEX6Q13608 980 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 SNAPC1Q16533 368 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 DECR1Q16698 335 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 ZNF750Q32MQ0 723 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PDLIM3Q53GG5 364 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 KLHL26Q53HC5 615 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PMS2CLQ68D20 193 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 GRAMD4Q6IC98 578 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 SNRNP48Q6IEG0 339 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 CCDC137Q6PK04 289 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 SERINC5Q86VE9 423 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 MFN1Q8IWA4 741 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 UBQLNLQ8IYU4 475 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 CENPLQ8N0S6 344 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 LILRA3Q8N6C8 439 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 IL22RA1Q8N6P7 574 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 LEMD2Q8NC56 503 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 TTLQ8NG68 377 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 OR10T2Q8NGX3 314 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 CAGE1Q8TC20 777 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 ADIPOR1Q96A54 375 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 DDX47Q9H0S4 455 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PDZD7Q9H5P4 517 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 ASNSD1Q9NWL6 643 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 TUBA8Q9NY65 449 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PRR13Q9NZ81 148 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 OR6C3Q9NZP0 311 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 MBD2Q9UBB5 411 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 STK17AQ9UEE5 414 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 SHOC2Q9UQ13 582 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 LRRC42Q9Y546 428 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 XIRP1Q702N8 1843 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 RPTORQ8N122 1335 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 MACROD2A1Z1Q3 448 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 TRIM24O15164 1050 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PPM1DO15297 605 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 ZNF208O43345 1280 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 CRCPO75575 148 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 RAD17O75943 681 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 CDK14O94921 469 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 GNAZP19086 355 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 RAP1GAPP47736 663 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 FOXM1Q08050 763 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 USP41Q3LFD5 358 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 RABGAP1LQ5R372 815 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 WLSQ5T9L3 541 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 LRRC38Q5VT99 294 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC25A25Q6KCM7 469 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 TRMT10CQ7L0Y3 403 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 YRDCQ86U90 279 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 CABP7Q86V35 215 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 NLGN4XQ8N0W4 816 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 LSMEM2Q8N112 164 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 LINC00528Q8N1L1 170 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PYROXD2Q8N2H3 581 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 GUF1Q8N442 669 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 BEND2Q8NDZ0 799 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 NCOA7Q8NI08 942 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PLEKHO2Q8TD55 490 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 KCNJ9Q92806 393 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 OSTF1Q92882 214 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 TOP1MTQ969P6 601 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 REPS1Q96D71 796 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 SSX3Q99909 188 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 INPP5KQ9BT40 448 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PITHD1Q9GZP4 211 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 EPB41L1Q9H4G0 881 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 ROPN1Q9HAT0 212 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 LZTFL1Q9NQ48 299 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 VPS54Q9P1Q0 977 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 ERVK-11Q9UQG0 969 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 DTX4Q9Y2E6 619 aa6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 MRPS17Q9Y2R5 130 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-209ENST00000512476 PEAK1Q9H792 1746 aa6.15□□□□□ -1.42
TRAPPC11-209ENST00000512476 ANKRD66B4E2M5 251 aa6.15□□□□□ -1.42
TRAPPC11-209ENST00000512476 ADM5C9JUS6 153 aa6.15□□□□□ -1.42
TRAPPC11-209ENST00000512476 F8W810 466 aa6.15□□□□□ -1.42
TRAPPC11-209ENST00000512476 UBE2Q2LH0YL09 131 aa6.15□□□□□ -1.42
TRAPPC11-209ENST00000512476 GAS2O43903 313 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms