RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PDHA2P29803 388 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 PMS2P54278 862 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 RPS18P62269 152 aaKnown RBP12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 ABRQ12979 859 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 GPS2Q13227 327 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 DBN1Q16643 649 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 P3H1Q32P28 736 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 ZRANB3Q5FWF4 1079 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 TMEM126BQ8IUX1 230 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 SYCE1Q8N0S2 351 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 CLDN19Q8N6F1 224 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 SLC38A9Q8NBW4 561 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 OR8K5Q8NH50 307 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 LCN9Q8WX39 176 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 TMEM121Q9BTD3 319 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 GPR87Q9BY21 358 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 LATS2Q9NRM7 1088 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 C1GALT1Q9NS00 363 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 SOHLH2Q9NX45 425 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 CAPN6Q9Y6Q1 641 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 FER1L5A0AVI2 2057 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 PRRC2CQ9Y520 2896 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 SPTAN1Q13813 2472 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 RP1L1Q8IWN7 2480 aaPredicted RBP12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 GSAPA4D1B5 854 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 MROH6A6NGR9 719 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 SLC9B1P1A6NJY1 282 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 MKRN2OSH3BPM6 223 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 MATN2O00339 956 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 BTN3A3O00478 584 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 BTN3A1O00481 513 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 RFPL1O75677 317 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 DNAJB5O75953 348 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 PTMAP06454 111 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 PSMA3P25788 255 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 PTPN4P29074 926 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 PREPP48147 710 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 CD151P48509 253 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 CACNG1Q06432 222 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 PRKAA1Q13131 559 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 RPA4Q13156 261 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 IL10RAQ13651 578 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 KRT33BQ14525 404 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 ZNF789Q5FWF6 425 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 TMTC4Q5T4D3 741 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 PRAMEF17Q5VTA0 474 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 TCTN3Q6NUS6 607 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 TAS2R42Q7RTR8 314 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 GAS2L3Q86XJ1 694 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 TAB3Q8N5C8 712 aaPredicted RBP12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 OR52E1Q8NGJ3 308 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 STYXQ8WUJ0 223 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 CDKN2AIPNLQ96HQ2 116 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 HES6Q96HZ4 224 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 FERD3LQ96RJ6 166 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 HGH1Q9BTY7 390 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 PITPNM3Q9BZ71 974 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 SRMSQ9H3Y6 488 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 TFB2MQ9H5Q4 396 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 KCND1Q9NSA2 647 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 MAN2B2Q9Y2E5 1009 aa12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 TNRC6AQ8NDV7 1962 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-205ENST00000508319 USP9YO00507 2555 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 OR51F1A6NGY5 319 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 IFRD1O00458 451 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 AP2A2O94973 939 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 GSTM1P09488 218 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 MSL3P1P0C860 447 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 ST6GAL1P15907 406 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 CDH3P22223 829 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 PRDX3P30048 256 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 FOXN2P32314 431 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 RORAP35398 523 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 FOXK1P85037 733 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 GSTM4Q03013 218 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 KIF5AQ12840 1032 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 SEMA5AQ13591 1074 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 BOP1Q14137 746 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 UGT8Q16880 541 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 COLEC12Q5KU26 742 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 IZUMO3Q5VZ72 239 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 CPZQ66K79 652 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 SYVN1Q86TM6 617 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 APLFQ8IW19 511 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 ADGRF3Q8IZF5 1079 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 PHC3Q8NDX5 983 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 OR13J1Q8NGT2 312 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 OR1L3Q8NH93 324 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 ATG4AQ8WYN0 398 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 SEC14L1Q92503 715 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 TFGQ92734 400 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 MR1Q95460 341 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 LRFN5Q96NI6 719 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 TRIM55Q9BYV6 548 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 MVB12BQ9H7P6 319 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 FANCEQ9HB96 536 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 TLK1Q9UKI8 766 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 PRSS21Q9Y6M0 314 aa12.62□□□□□ -0.39
HMGCS1-205ENST00000508319 CCDC78A2IDD5 438 aa12.61□□□□□ -0.39
HMGCS1-205ENST00000508319 CYSRT1A8MQ03 144 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms