RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SOHLH2Q9NX45 425 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 POMT2Q9UKY4 750 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 SNRNP200O75643 2136 aaKnown RBP13.88□□□□□ -0.19
RAB28-205ENST00000508274 HEATR9A2RTY3 570 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 GSAPA4D1B5 854 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 E7EVH7 732 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 IFRD1O00458 451 aaPredicted RBP13.88□□□□□ -0.19
RAB28-205ENST00000508274 BTN3A3O00478 584 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 OR1I1O60431 355 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 KATNA1O75449 491 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 ZBTB11O95625 1053 aaPredicted RBP13.88□□□□□ -0.19
RAB28-205ENST00000508274 GOT2P00505 430 aaKnown RBP13.88□□□□□ -0.19
RAB28-205ENST00000508274 CDH3P22223 829 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 NSG1P42857 185 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 CCR10P46092 362 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 HSD11B2P80365 405 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 ACY1Q03154 408 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 KCNAB2Q13303 367 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 SEMA5AQ13591 1074 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 ERV3-1Q14264 604 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 SKIDA1Q1XH10 827 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 TSTD2Q5T7W7 516 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 PRAMEF17Q5VTA0 474 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 TMEM135Q86UB9 458 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 CT55Q8WUE5 264 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 HDAC10Q969S8 669 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 ZNF501Q96CX3 271 aaPredicted RBP13.88□□□□□ -0.19
RAB28-205ENST00000508274 TLR10Q9BXR5 811 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 LHX9Q9NQ69 397 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 CASS4Q9NQ75 786 aa13.88□□□□□ -0.19
RAB28-205ENST00000508274 HEMK1Q9Y5R4 338 aaPredicted RBP13.88□□□□□ -0.19
RAB28-205ENST00000508274 SLC9B1P1A6NJY1 282 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 AP2A2O94973 939 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 APRTP07741 180 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 SFTPCP11686 197 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 RPL22P35268 128 aaKnown RBP13.87□□□□□ -0.19
RAB28-205ENST00000508274 CD151P48509 253 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 TUBB4BP68371 445 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 PRKAA1Q13131 559 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 RPA4Q13156 261 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 TUBB2AQ13885 445 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 BOP1Q14137 746 aaKnown RBP13.87□□□□□ -0.19
RAB28-205ENST00000508274 SEMA3AQ14563 771 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 ITIH4Q14624 930 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 CYB5D1Q6P9G0 228 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 FAM199XQ6PEV8 388 aaPredicted RBP13.87□□□□□ -0.19
RAB28-205ENST00000508274 PACS1Q6VY07 963 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 ZNF534Q76KX8 674 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 CCDC89Q8N998 374 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 OR5AR1Q8NGP9 310 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 ELMO1Q92556 727 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 TFGQ92734 400 aaPredicted RBP13.87□□□□□ -0.19
RAB28-205ENST00000508274 TUBB2BQ9BVA1 445 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 KLHL25Q9H0H3 589 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 ADNPQ9H2P0 1102 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 PADI1Q9ULC6 663 aa13.87□□□□□ -0.19
RAB28-205ENST00000508274 GAS8O95995 478 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 CCDC175P0C221 793 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 PVRP15151 417 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 ST6GAL1P15907 406 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 PRDX3P30048 256 aaKnown RBP13.86□□□□□ -0.19
RAB28-205ENST00000508274 CRADDP78560 199 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 CCZ1BP86790 482 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 CCZ1P86791 482 aaPredicted RBP13.86□□□□□ -0.19
RAB28-205ENST00000508274 ABRQ12979 859 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 DNASE1L3Q13609 305 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 AFTPHQ6ULP2 937 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 PTRH1Q86Y79 214 aaKnown RBP13.86□□□□□ -0.19
RAB28-205ENST00000508274 LKAAEAR1Q8TD35 194 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 RANBP9Q96S59 729 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 MVB12BQ9H7P6 319 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 C1GALT1Q9NS00 363 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 PAK5Q9P286 719 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 ICKQ9UPZ9 632 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 BTRCQ9Y297 605 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 TCAF1Q9Y4C2 921 aa13.86□□□□□ -0.19
RAB28-205ENST00000508274 FER1L5A0AVI2 2057 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 LIN7AO14910 233 aaPredicted RBP13.85□□□□□ -0.19
RAB28-205ENST00000508274 SCRG1O75711 98 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 FGGP02679 453 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 FTH1P02794 183 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 MT-ND3P03897 115 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 CCNYL3P0C7X3 344 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 ADRA1DP25100 572 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 ACADLP28330 430 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 CSE1LP55060 971 aaKnown RBP13.85□□□□□ -0.19
RAB28-205ENST00000508274 RPS18P62269 152 aaKnown RBP13.85□□□□□ -0.19
RAB28-205ENST00000508274 MC1RQ01726 317 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 ACVR1Q04771 509 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 GPS2Q13227 327 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 CCNG2Q16589 344 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 CRTC2Q53ET0 693 aaPredicted RBP13.85□□□□□ -0.19
RAB28-205ENST00000508274 ZNF449Q6P9G9 518 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 LDB1Q86U70 411 aaPredicted RBP13.85□□□□□ -0.19
RAB28-205ENST00000508274 AMIGO1Q86WK6 493 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 TMEM126BQ8IUX1 230 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 LRRC8AQ8IWT6 810 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 ADGRF3Q8IZF5 1079 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 CARFQ8N187 725 aa13.85□□□□□ -0.19
RAB28-205ENST00000508274 SLC38A9Q8NBW4 561 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms