RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 IFRD1O00458 451 aaPredicted RBP17.07■□□□□ 0.32
RNF4-209ENST00000507784 SLC16A5O15375 505 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 JUNDP17535 347 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 MAP4P27816 1152 aaKnown RBP17.07■□□□□ 0.32
RNF4-209ENST00000507784 ACTR1BP42025 376 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 BLKP51451 505 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 AFF3P51826 1226 aaKnown RBP17.07■□□□□ 0.32
RNF4-209ENST00000507784 HK3P52790 923 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 ACTR1AP61163 376 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 DMPKQ09013 629 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 ASPHQ12797 758 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 SIM2Q14190 667 aaPredicted RBP17.07■□□□□ 0.32
RNF4-209ENST00000507784 CHI3L2Q15782 390 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 SBSNQ6UWP8 590 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 XKR5Q6UX68 686 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 SPATS2Q86XZ4 545 aaKnown RBP17.07■□□□□ 0.32
RNF4-209ENST00000507784 FBXO39Q8N4B4 442 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 CCL4L1Q8NHW4 92 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 C1orf216Q8TAB5 229 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 MCOLN3Q8TDD5 553 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 ASB11Q8WXH4 323 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 OR52A5Q9H2C5 316 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 TCEAL2Q9H3H9 227 aaPredicted RBP17.07■□□□□ 0.32
RNF4-209ENST00000507784 CAAP1Q9H8G2 361 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 MANSC1Q9H8J5 431 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 GPR27Q9NS67 375 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 NUDT4Q9NZJ9 180 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 NCKIPSDQ9NZQ3 722 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 TMCO1Q9UM00 188 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 OARD1Q9Y530 152 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 DGKBQ9Y6T7 804 aa17.07■□□□□ 0.32
RNF4-209ENST00000507784 TDRD6O60522 2096 aaKnown RBP17.07■□□□□ 0.32
RNF4-209ENST00000507784 ZFC3H1O60293 1989 aaKnown RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 TP53BP1Q12888 1972 aaPredicted RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 TNRC6BQ9UPQ9 1833 aaKnown RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 A0A1B0GTW7 788 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 A0A1B0GVT2 93 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 A8MT66 165 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 PRR5-ARHGAP8B1AHC4 643 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 VILLO15195 856 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 TRIM13O60858 407 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 MATN4O95460 622 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 CATP04040 527 aaKnown RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 MAPK9P45984 424 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 BDKRB1P46663 353 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 RPIAP49247 311 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 NXPH1P58417 271 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 ILF3Q12906 894 aaKnown RBP eCLIP17.06■□□□□ 0.32
RNF4-209ENST00000507784 SP140Q13342 867 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 C1orf61Q13536 156 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 LRP8Q14114 963 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 PDK4Q16654 411 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 PHKG1Q16816 387 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 PFKFB4Q16877 469 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 SLC30A9Q6PML9 568 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 ZCCHC23Q6ZST2 131 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 PDZD3Q86UT5 571 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 SLC22A9Q8IVM8 553 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 CCNYL1Q8N7R7 359 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 PTGR2Q8N8N7 351 aaPredicted RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 PHC3Q8NDX5 983 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 SPDYE1Q8NFV5 336 aaPredicted RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 ZNF75CPQ92670 426 aaPredicted RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 NELL1Q92832 810 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 CCDC126Q96EE4 140 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 FERD3LQ96RJ6 166 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 SLC12A9Q9BXP2 914 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 GSDMCQ9BYG8 508 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 PARVBQ9HBI1 364 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 PRDM8Q9NQV8 689 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 OXSMQ9NWU1 459 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 TRNAU1APQ9NX07 287 aaKnown RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 APOBEC3BQ9UH17 382 aaKnown RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 KLF15Q9UIH9 416 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 PDE10AQ9Y233 779 aa17.06■□□□□ 0.32
RNF4-209ENST00000507784 CFAP20Q9Y6A4 193 aaKnown RBP17.06■□□□□ 0.32
RNF4-209ENST00000507784 NCOR1O75376 2440 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 FANCMQ8IYD8 2048 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 GFYI3L273 518 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 FFAR2O15552 330 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 PSIP1O75475 530 aaKnown RBP17.05■□□□□ 0.32
RNF4-209ENST00000507784 ENO2P09104 434 aaPredicted RBP17.05■□□□□ 0.32
RNF4-209ENST00000507784 FGF3P11487 239 aaPredicted RBP17.05■□□□□ 0.32
RNF4-209ENST00000507784 HALP42357 657 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 PRKAA2P54646 552 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 STX3Q13277 289 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 KRT33BQ14525 404 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 TGFBIQ15582 683 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 PRAMEF14Q5SWL7 426 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 LIPMQ5VYY2 423 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 ATG16L1Q676U5 607 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 TTC23LQ6PF05 361 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 TAF8Q7Z7C8 310 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 TFGQ92734 400 aaPredicted RBP17.05■□□□□ 0.32
RNF4-209ENST00000507784 DLG3Q92796 817 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 ZC3H10Q96K80 434 aaKnown RBP17.05■□□□□ 0.32
RNF4-209ENST00000507784 RMDN2Q96LZ7 410 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 C12orf66Q96MD2 445 aa17.05■□□□□ 0.32
RNF4-209ENST00000507784 INSM2Q96T92 566 aaPredicted RBP17.05■□□□□ 0.32
RNF4-209ENST00000507784 COL25A1Q9BXS0 654 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms