RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 GPR3P46089 330 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 ILKQ13418 452 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 GBX1Q14549 363 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 CLCA4Q14CN2 919 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 PROX2Q3B8N5 592 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 PAQR3Q6TCH7 311 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 TBC1D1Q86TI0 1168 aaPredicted RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 ALYREFQ86V81 257 aaKnown RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 C17orf82Q86X59 251 aaPredicted RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 SLC35F3Q8IY50 421 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 LILRA3Q8N6C8 439 aaPredicted RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 WDR48Q8TAF3 677 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 SLC37A2Q8TED4 501 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 DCAKDQ8WVC6 231 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 ANKRD7Q92527 254 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 PDLIM5Q96HC4 596 aaKnown RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 RUFY1Q96T51 708 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 INSM2Q96T92 566 aaPredicted RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 SLC38A3Q99624 504 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 RTKNQ9BST9 563 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 DHRS4Q9BTZ2 278 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 TRIM54Q9BYV2 358 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 EPB41L1Q9H4G0 881 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 UCK1Q9HA47 277 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 LRIT1Q9P2V4 623 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 CDYLQ9Y232 598 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 VPS13AQ96RL7 3174 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 ZFHX2Q9C0A1 2572 aaPredicted RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 BPTFQ12830 3046 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 TRBV23OR9-2A0A075B6M9 112 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 A0A087X1B8 175 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 MPOP05164 745 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 BRAFP15056 766 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 SLC19A1P41440 591 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 ABRQ12979 859 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 ACSBG2Q5FVE4 666 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 UBAP2Q5T6F2 1119 aaKnown RBP19.6■□□□□ 0.73
USP53-203ENST00000507597 KLHL35Q6PF15 583 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 NAPRTQ6XQN6 538 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 PIP4P1Q86T03 277 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 CPNE9Q8IYJ1 553 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 KYQ8NBH2 561 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 OLFM1Q99784 485 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 PLAAQ9Y263 795 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 BTBD3Q9Y2F9 522 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 WDR37Q9Y2I8 494 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 MED16Q9Y2X0 877 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 ACOT9Q9Y305 439 aa19.6■□□□□ 0.73
USP53-203ENST00000507597 CCDC189A1A4V9 331 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 CPED1A4D0V7 1026 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 OR52A4PA6NMU1 304 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 SLC16A5O15375 505 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 GP1BAP07359 652 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 C8GP07360 202 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 HIST1H2AGP0C0S8 130 aaPredicted RBP19.59■□□□□ 0.73
USP53-203ENST00000507597 ZNF37AP17032 561 aaPredicted RBP19.59■□□□□ 0.73
USP53-203ENST00000507597 HIST1H2ADP20671 130 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 CYP2A7P20853 494 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 ACP1P24666 158 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 ACADLP28330 430 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 ATP6V0D1P61421 351 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 TRIP6Q15654 476 aaKnown RBP19.59■□□□□ 0.73
USP53-203ENST00000507597 ZKSCAN8Q15776 578 aaPredicted RBP19.59■□□□□ 0.73
USP53-203ENST00000507597 BEND6Q5SZJ8 279 aaPredicted RBP19.59■□□□□ 0.73
USP53-203ENST00000507597 DCUN1D3Q8IWE4 304 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 OR5K2Q8NHB8 316 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 CFAP61Q8NHU2 1237 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 RAD51AP1Q96B01 352 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 LINGO1Q96FE5 620 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 HIST1H2AHQ96KK5 128 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 RMDN2Q96LZ7 410 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 HIST1H2AJQ99878 128 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 H2AFJQ9BTM1 129 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 TMEM109Q9BVC6 243 aa19.59■□□□□ 0.73
USP53-203ENST00000507597 CABIN1Q9Y6J0 2220 aa19.58■□□□□ 0.73
USP53-203ENST00000507597 TLDC2A0PJX2 215 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 TRIM49D1C9J1S8 452 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 EML2O95834 649 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 SHBGP04278 402 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 CEACAM1P13688 526 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 KRT15P19012 456 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 PPM1FP49593 454 aaPredicted RBP19.58■□□□□ 0.72
USP53-203ENST00000507597 KPNA2P52292 529 aaKnown RBP19.58■□□□□ 0.72
USP53-203ENST00000507597 MAZP56270 477 aaKnown RBP19.58■□□□□ 0.72
USP53-203ENST00000507597 UBE2IP63279 158 aaKnown RBP19.58■□□□□ 0.72
USP53-203ENST00000507597 E2F1Q01094 437 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 SP140Q13342 867 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 BMPR2Q13873 1038 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 PLCL1Q15111 1095 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 FAM83EQ2M2I3 478 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 KLC3Q6P597 504 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 LRIG3Q6UXM1 1119 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 TIFABQ6ZNK6 161 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 GLRX5Q86SX6 157 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 PIM3Q86V86 326 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 ACVR1CQ8NER5 493 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 SPDYE1Q8NFV5 336 aaPredicted RBP19.58■□□□□ 0.72
USP53-203ENST00000507597 MCOLN3Q8TDD5 553 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 ACMSDQ8TDX5 336 aa19.58■□□□□ 0.72
USP53-203ENST00000507597 EEF1AKMT1Q8WVE0 214 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms