RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 IRF8Q02556 426 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 CXCL9Q07325 125 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 TBR1Q16650 682 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 MPPE1Q53F39 396 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 ARHGEF16Q5VV41 709 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 KRT79Q5XKE5 535 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 NCR3LG1Q68D85 454 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 UBQLNLQ8IYU4 475 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 CENPLQ8N0S6 344 aaPredicted RBP5.12□□□□□ -1.59
NIPBL-204ENST00000504430 GHDCQ8N2G8 530 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 ZNF248Q8NDW4 579 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 OR52J3Q8NH60 311 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 OR1E3Q8WZA6 343 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 DIRC2Q96SL1 478 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 WWP1Q9H0M0 922 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 IL20Q9NYY1 176 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 EMC3Q9P0I2 261 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 ENPP5Q9UJA9 477 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 AMFRQ9UKV5 643 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 RHBDD3Q9Y3P4 386 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 ATG4BQ9Y4P1 393 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 USP16Q9Y5T5 823 aa5.12□□□□□ -1.59
NIPBL-204ENST00000504430 C4orf47A7E2U8 309 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 CCDC188H7C350 402 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ZNF202O95125 648 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 IGFBP1P08833 259 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 CNN1P51911 297 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 GPR176Q14439 515 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 SMN1Q16637 294 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 SPOUT1Q5T280 376 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 MAB21L3Q8N8X9 362 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 LEMD2Q8NC56 503 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 CCNL2Q96S94 520 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ADAM2Q99965 735 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 DDX47Q9H0S4 455 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 NUDT15Q9NV35 164 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 UPB1Q9UBR1 384 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 POLLQ9UGP5 575 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 HAO1Q9UJM8 370 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 LEF1Q9UJU2 399 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 DDX19BQ9UMR2 479 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ZNF148Q9UQR1 794 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 UBE2J1Q9Y385 318 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 MAB21L2Q9Y586 359 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 EVC2Q86UK5 1308 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 IQCF5A8MTL0 148 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 C12orf71A8MTZ7 269 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 TEX28O15482 410 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 NKX2-8O15522 239 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 TMEM225BP0DP42 221 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 KRT3P12035 628 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 CYP2B6P20813 491 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 UGT1A1P22309 533 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 HTR6P50406 440 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 BASP1P80723 227 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 GOLGA8FQ08AF8 430 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ILKQ13418 452 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 CBWD6Q4V339 395 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 CBWD3Q5JTY5 395 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 GRTP1Q5TC63 336 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ATL3Q6DD88 541 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 PRSS55Q6UWB4 352 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 DPP8Q6V1X1 898 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 AMIGO3Q86WK7 504 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 SELENOHQ8IZQ5 122 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 OR4A15Q8NGL6 344 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 RAB3IL1Q8TBN0 382 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 PHOSPHO2Q8TCD6 241 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 LKAAEAR1Q8TD35 194 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 NSMCE1Q8WV22 266 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 PIGKQ92643 395 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 REPS1Q96D71 796 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ZSWIM1Q9BR11 485 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 CWC15Q9P013 229 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 UBQLN2Q9UHD9 624 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 SLC25A13Q9UJS0 675 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 PCDHA12Q9UN75 941 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 PLEKHG2Q9H7P9 1386 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 LRRIQ3A6PVS8 624 aaPredicted RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 MAGEB17A8MXT2 336 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 H0Y8G0 127 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ZNF208O43345 1280 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 C8BP07358 591 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ASNSP08243 561 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 SERPINF2P08697 491 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 EPHB2P29323 1055 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 NMT1P30419 496 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 NCBP1Q09161 790 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ADGRE1Q14246 886 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 RBBP5Q15291 538 aaKnown RBP5.11□□□□□ -1.59
NIPBL-204ENST00000504430 GSTA3Q16772 222 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ANKRD16Q6P6B7 361 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 HAPLN4Q86UW8 402 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 MCUQ8NE86 351 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 SLC26A7Q8TE54 656 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 CDKL2Q92772 493 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 ZNF479Q96JC4 524 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 TMEM246Q9BRR3 403 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 SLCO5A1Q9H2Y9 848 aa5.11□□□□□ -1.59
NIPBL-204ENST00000504430 TNFRSF12AQ9NP84 129 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms