RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 LINC00696Q6ZRV3 163 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 RFX8Q6ZV50 586 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 DET1Q7L5Y6 550 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 MRGPRGQ86SM5 289 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 TRIM73Q86UV7 250 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 RAB43Q86YS6 212 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 TRAPPC5Q8IUR0 188 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 CEP97Q8IW35 865 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 DSELQ8IZU8 1212 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 UMODL1-AS1Q8N2C9 162 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 CBARPQ8N350 705 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 GALNT16Q8N428 558 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 ZADH2Q8N4Q0 377 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 ATPAF2Q8N5M1 289 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 METTL27Q8N6F8 245 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 ARFGAP1Q8N6T3 406 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 AVL9Q8NBF6 648 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 CLEC1AQ8NC01 280 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 OR1L3Q8NH93 324 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 PIH1D2Q8WWB5 315 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 KLHL6Q8WZ60 621 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 NTAN1Q96AB6 310 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 SH3KBP1Q96B97 665 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 ZNF501Q96CX3 271 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 DHTKD1Q96HY7 919 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 GBP5Q96PP8 586 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 NUDCD1Q96RS6 583 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 PCDHB18PQ96TA0 734 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 MGME1Q9BQP7 344 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 SPATA16Q9BXB7 569 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 TRIM7Q9C029 511 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 SLC7A5P2Q9GIP4 190 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 RETREG1Q9H6L5 497 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 ZNF552Q9H707 407 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 CBX8Q9HC52 389 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 NLRC4Q9NPP4 1024 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 AGPAT4Q9NRZ5 378 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 FAM207AQ9NSI2 230 aaPredicted RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 OLAHQ9NV23 265 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 IMP3Q9NV31 184 aaKnown RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 IRAK4Q9NWZ3 460 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 TAB2Q9NYJ8 693 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 DHCR7Q9UBM7 475 aaKnown RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 TINAGQ9UJW2 476 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 NOCTQ9UK39 431 aaKnown RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 FBXL4Q9UKA2 621 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 CNOT6Q9ULM6 557 aaKnown RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 PHTF1Q9UMS5 762 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 SHOC2Q9UQ13 582 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 PTRH2Q9Y3E5 179 aaKnown RBP3.53□□□□□ -1.84
USP46-205ENST00000504078 MED13LQ71F56 2210 aa3.53□□□□□ -1.84
USP46-205ENST00000504078 APCP25054 2843 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 FER1L5A0AVI2 2057 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 A0A0J9YYE9 177 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.52□□□□□ -1.85
USP46-205ENST00000504078 BICDL2A1A5D9 508 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 OR6C74A6NCV1 312 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 OR5K3A6NET4 321 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 SLC9B1P1A6NJY1 282 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 FAM90A27PA6NNH2 459 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 TMCO5BA8MYB1 307 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 PSMD11O00231 422 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 CCL21O00585 134 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 KCNN4O15554 427 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 HCRTR1O43613 425 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 NUAK1O60285 661 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 JRKO75564 520 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 WISP2O76076 250 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 UNC5CO95185 931 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 LSM8O95777 96 aaKnown RBP3.52□□□□□ -1.85
USP46-205ENST00000504078 PEX11BO96011 259 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 MT-CYBP00156 380 aaPredicted RBP3.52□□□□□ -1.85
USP46-205ENST00000504078 TRBC1P01850 177 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 HLA-DQB2P05538 268 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 KLK3P07288 261 aaPredicted RBP3.52□□□□□ -1.85
USP46-205ENST00000504078 UMODP07911 640 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 UQCRHP07919 91 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 CELA2AP08217 269 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 STSP08842 583 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 CBSLP0DN79 551 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 KRT3P12035 628 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 ST6GAL1P15907 406 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 ZNF7P17097 686 aaPredicted RBP3.52□□□□□ -1.85
USP46-205ENST00000504078 BPIP17213 487 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 LPOP22079 712 aaPredicted RBP3.52□□□□□ -1.85
USP46-205ENST00000504078 CDH3P22223 829 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 MMP8P22894 467 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 PSMA2P25787 234 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 TEAD1P28347 426 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 RORAP35398 523 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 PTGER4P35408 488 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 CBSP35520 551 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 FOLR3P41439 243 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 KIR3DL1P43629 444 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 MMP13P45452 471 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 NSFP46459 744 aaKnown RBP3.52□□□□□ -1.85
USP46-205ENST00000504078 CLCNKAP51800 687 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 TDGF1P3P51864 188 aa3.52□□□□□ -1.85
USP46-205ENST00000504078 RRADP55042 308 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms