RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 BTN3A1O00481 513 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 PSMD3O43242 534 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 OR1I1O60431 355 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 ZNF189O75820 626 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-204ENST00000503215 ZBTB11O95625 1053 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-204ENST00000503215 IFNB1P01574 187 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 CCNYL3P0C7X3 344 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 PVRP15151 417 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 NR1D1P20393 614 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 MSNP26038 577 aaKnown RBP15.79■□□□□ 0.12
SCLT1-204ENST00000503215 NDUFS1P28331 727 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 MC1RQ01726 317 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 ACY1Q03154 408 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 BRD3Q15059 726 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 CRTC2Q53ET0 693 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-204ENST00000503215 RNF10Q8N5U6 811 aaKnown RBP15.79■□□□□ 0.12
SCLT1-204ENST00000503215 OR52E1Q8NGJ3 308 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 OR13J1Q8NGT2 312 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 HDAC10Q969S8 669 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 LRRC45Q96CN5 670 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 HGH1Q9BTY7 390 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 HEBP2Q9Y5Z4 205 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 NBASA2RRP1 2371 aa15.79■□□□□ 0.12
SCLT1-204ENST00000503215 PIPSLA2A3N6 862 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 GSAPA4D1B5 854 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 CDC14CA4D256 554 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 CREG1O75629 220 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 TPBGLP0DKB5 382 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 ST6GAL1P15907 406 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 PRDX3P30048 256 aaKnown RBP15.78■□□□□ 0.12
SCLT1-204ENST00000503215 TUBB4BP68371 445 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 KCNC4Q03721 635 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 ABRQ12979 859 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 GPS2Q13227 327 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 TUBB2AQ13885 445 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 BOP1Q14137 746 aaKnown RBP15.78■□□□□ 0.12
SCLT1-204ENST00000503215 SIX1Q15475 284 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-204ENST00000503215 FAM69BQ5VUD6 431 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 TFGQ92734 400 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-204ENST00000503215 FCRL4Q96PJ5 515 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 TUBB2BQ9BVA1 445 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 ACTL8Q9H568 366 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 KCND1Q9NSA2 647 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 SOHLH2Q9NX45 425 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 TUBD1Q9UJT1 453 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 ZNF148Q9UQR1 794 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 BTRCQ9Y297 605 aa15.78■□□□□ 0.12
SCLT1-204ENST00000503215 SEC16AO15027 2179 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 BHMG1C9JSJ3 638 aaPredicted RBP15.77■□□□□ 0.12
SCLT1-204ENST00000503215 SCRG1O75711 98 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 SUN1O94901 812 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 GOT2P00505 430 aaKnown RBP15.77■□□□□ 0.12
SCLT1-204ENST00000503215 CDH3P22223 829 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 ACADLP28330 430 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 STIP1P31948 543 aaKnown RBP15.77■□□□□ 0.12
SCLT1-204ENST00000503215 CD151P48509 253 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 TERF1P54274 439 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 LAMB3Q13751 1172 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 SEMA3AQ14563 771 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 ZNF789Q5FWF6 425 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 TMEM126BQ8IUX1 230 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 ADGRF3Q8IZF5 1079 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 TXLNBQ8N3L3 684 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 DNAAF3Q8N9W5 541 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 OR5AR1Q8NGP9 310 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 C9orf43Q8TAL5 461 aaPredicted RBP15.77■□□□□ 0.12
SCLT1-204ENST00000503215 ALS2CR12Q96Q35 445 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 TWSG1Q9GZX9 223 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 TFB2MQ9H5Q4 396 aaKnown RBP15.77■□□□□ 0.12
SCLT1-204ENST00000503215 CLMPQ9H6B4 373 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 RAB6BQ9NRW1 208 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 ICKQ9UPZ9 632 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 PCDHB3Q9Y5E6 796 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 PCDHGA6Q9Y5G7 932 aa15.77■□□□□ 0.12
SCLT1-204ENST00000503215 IFRD1O00458 451 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-204ENST00000503215 AP2A2O94973 939 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 MT-ND3P03897 115 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 RPL22P35268 128 aaKnown RBP15.76■□□□□ 0.11
SCLT1-204ENST00000503215 LMAN1P49257 510 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 TLE1Q04724 770 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 CDH17Q12864 832 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 PRKAA1Q13131 559 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 RPA4Q13156 261 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 PLEKHS1Q5SXH7 462 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 TSTD2Q5T7W7 516 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 SEL1L2Q5TEA6 688 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 MEI1Q5TIA1 1274 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 PPP1R21Q6ZMI0 780 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 ZNF534Q76KX8 674 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 LINC00523Q86TU6 105 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 LDB1Q86U70 411 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-204ENST00000503215 TRIM73Q86UV7 250 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 BPHLQ86WA6 291 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-204ENST00000503215 AMIGO1Q86WK6 493 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 LMNTD1Q8N9Z9 388 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 OR1L3Q8NH93 324 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 ELMO1Q92556 727 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 MR1Q95460 341 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 TRAPPC9Q96Q05 1148 aa15.76■□□□□ 0.11
SCLT1-204ENST00000503215 EPN3Q9H201 632 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms