RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 LRFN1Q9P244 771 aa11.05□□□□□ -0.64
AC055713.1-201ENST00000498967 TNS3Q68CZ2 1445 aa11.05□□□□□ -0.64
AC055713.1-201ENST00000498967 ATP6AP2A0A1C7CYW4 349 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 PPP1R3GB7ZBB8 358 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CETPP11597 493 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 IL7RP16871 459 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CAPN3P20807 821 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 PRKCHP24723 683 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 UQCRC1P31930 480 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 TRAM1Q15629 374 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 GTF2H5Q6ZYL4 71 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 PSTKQ8IV42 348 aaKnown RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 SLC22A15Q8IZD6 547 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 DENND1AQ8TEH3 1009 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 GDF3Q9NR23 364 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 GSKIPQ9P0R6 139 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 OIP5O43482 229 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ASGR1P07306 291 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CD79BP40259 229 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 MAN2A2P49641 1150 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 RPP30P78346 268 aaKnown RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ELF3P78545 371 aaPredicted RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CRADDP78560 199 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 SBK1Q52WX2 424 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 VTCN1Q7Z7D3 282 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ARL14Q8N4G2 192 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 TULP4Q9NRJ4 1543 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 E7EQ34 232 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 AZIN1O14977 448 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 LPLP06858 475 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 AZGP1P25311 298 aaKnown RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 SF1Q15637 639 aaKnown RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 PDSS1Q5T2R2 415 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 HFE2Q6ZVN8 426 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 NRKQ7Z2Y5 1582 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 TRPM1Q7Z4N2 1603 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 TPP1O14773 563 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 HCRTR2O43614 444 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CLEC3AO75596 197 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CBX6O95503 412 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 SSX2Q16385 188 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 IQCCQ4KMZ1 466 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 KIF18BQ86Y91 864 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ESX1Q8N693 406 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ATAD1Q8NBU5 361 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 MOB1AQ9H8S9 216 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ABCC13Q9NSE7 274 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ALKBH4Q9NXW9 302 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 GPSM3Q9Y4H4 160 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CAPN8A6NHC0 703 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 USP27XA6NNY8 438 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 PSMD9O00233 223 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 FPGTO14772 594 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 LPOP22079 712 aaPredicted RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 FCGRTP55899 365 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CRHR2Q13324 411 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CERS2Q96G23 380 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 SAMD10Q9BYL1 202 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 BRF2Q9HAW0 419 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 PTPRHQ9HD43 1115 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 TMEM45AQ9NWC5 275 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 SH2B3Q9UQQ2 575 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 DUXAA6NLW8 204 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 STK17BO94768 372 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ATP5C1P36542 298 aaKnown RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 NDST1P52848 882 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 VASH1Q7L8A9 365 aaPredicted RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 NIFKQ9BYG3 293 aaKnown RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 BRD7Q9NPI1 651 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 SAGE1Q9NXZ1 904 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 RIMKLBQ9ULI2 386 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ZCCHC11Q5TAX3 1644 aaKnown RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ZBTB22O15209 634 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CRTAPO75718 401 aaPredicted RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 SLC35G6P0C7Q6 338 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 RYKP34925 604 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF267Q14586 743 aaPredicted RBP11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 BATFQ16520 125 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 KCNT2Q6UVM3 1135 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 SH3RF1Q7Z6J0 888 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 TSPAN33Q86UF1 283 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 UNC5BQ8IZJ1 945 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 TM9SF4Q92544 642 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 ASF1AQ9Y294 204 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 KDM6BO15054 1643 aa11.04□□□□□ -0.64
AC055713.1-201ENST00000498967 CAP2P40123 477 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 TMEM62Q0P6H9 643 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 INAVAQ3KP66 663 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 BAIAP2L2Q6UXY1 529 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 TMEM203Q969S6 136 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 ZBED6CLQ96FA7 236 aaPredicted RBP11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 CISHQ9NSE2 258 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 TLL2Q9Y6L7 1015 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 CAPN6Q9Y6Q1 641 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 RAB19A4D1S5 217 aa11.03□□□□□ -0.64
AC055713.1-201ENST00000498967 SH3BGRLO75368 114 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms