RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 OLFM3Q96PB7 478 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 TRAPPC9Q96Q05 1148 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 FERD3LQ96RJ6 166 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 WDR77Q9BQA1 342 aaPredicted RBP13.5□□□□□ -0.25
CCDC58-207ENST00000498466 CCM2Q9BSQ5 444 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 PITPNM3Q9BZ71 974 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 DEF6Q9H4E7 631 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 RUBCNLQ9H714 662 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 ATP13A2Q9NQ11 1180 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 SMOXQ9NWM0 555 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 HACD3Q9P035 362 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 IFT80Q9P2H3 777 aaPredicted RBP13.5□□□□□ -0.25
CCDC58-207ENST00000498466 NOVA2Q9UNW9 492 aaKnown RBP13.5□□□□□ -0.25
CCDC58-207ENST00000498466 CSAG2Q9Y5P2 127 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 CROCCQ5TZA2 2017 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 ADGRG4Q8IZF6 3080 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 LOC285095A0A1B0GVY8 99 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 BTN3A3O00478 584 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 BTN3A1O00481 513 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 GAPDHSO14556 408 aaPredicted RBP13.49□□□□□ -0.25
CCDC58-207ENST00000498466 PRAMEF1O95521 474 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 SERPING1P05155 500 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 CD63P08962 238 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 PYGMP11217 842 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 ITGA3P26006 1051 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 PTPN3P26045 913 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 SLC9A5Q14940 896 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 HIF1AQ16665 826 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 HOOK3Q86VS8 718 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 LILRA3Q8N6C8 439 aaPredicted RBP13.49□□□□□ -0.25
CCDC58-207ENST00000498466 OR2Y1Q8NGV0 311 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 ZNF398Q8TD17 642 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 GRHL3Q8TE85 626 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 RBM41Q96IZ5 413 aaKnown RBP13.49□□□□□ -0.25
CCDC58-207ENST00000498466 TEKT5Q96M29 485 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 NAP1L5Q96NT1 182 aaPredicted RBP13.49□□□□□ -0.25
CCDC58-207ENST00000498466 GBP5Q96PP8 586 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
CCDC58-207ENST00000498466 UVRAGQ9P2Y5 699 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 AP1M2Q9Y6Q5 423 aa13.49□□□□□ -0.25
CCDC58-207ENST00000498466 AKAP9Q99996 3911 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 CELSR1Q9NYQ6 3014 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 A0A1B0GTH6 734 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 CCDC66A2RUB6 948 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 C2orf74A8MZ97 194 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 ZNF487B1APH4 448 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 E2F3O00716 465 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 STX7O15400 261 aaKnown RBP13.48□□□□□ -0.25
CCDC58-207ENST00000498466 OR2B3O76000 313 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 KRT38O76015 456 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 EDN3P14138 238 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 ZFXP17010 805 aaPredicted RBP13.48□□□□□ -0.25
CCDC58-207ENST00000498466 SOX8P57073 446 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 FOXL2P58012 376 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 DYNLT1P63172 113 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 DCDP81605 110 aaKnown RBP13.48□□□□□ -0.25
CCDC58-207ENST00000498466 CDC16Q13042 620 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 AIMP2Q13155 320 aaKnown RBP13.48□□□□□ -0.25
CCDC58-207ENST00000498466 PTPRCAPQ14761 206 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 DEFB110Q30KQ9 67 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 BCL7AQ4VC05 210 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 FIGNQ5HY92 759 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 RHBDD2Q6NTF9 364 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 KDELC1Q6UW63 502 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 PPP1R32Q7Z5V6 425 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 FJX1Q86VR8 437 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 RFX6Q8HWS3 928 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 PROKR1Q8TCW9 393 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 PPP4R1Q8TF05 950 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 SYN2Q92777 582 aaPredicted RBP13.48□□□□□ -0.25
CCDC58-207ENST00000498466 PTERQ96BW5 349 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 DCUN1D1Q96GG9 259 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 LINC00615Q96LM1 132 aaPredicted RBP13.48□□□□□ -0.25
CCDC58-207ENST00000498466 NRTNQ99748 197 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 AP1M1Q9BXS5 423 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 LCMT1Q9UIC8 334 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 CDYLQ9Y232 598 aa13.48□□□□□ -0.25
CCDC58-207ENST00000498466 HEATR9A2RTY3 570 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 AGPSO00116 658 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 IFRD1O00458 451 aaPredicted RBP13.47□□□□□ -0.25
CCDC58-207ENST00000498466 EPOP01588 193 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 NFKB1P19838 968 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 CD68P34810 354 aaPredicted RBP13.47□□□□□ -0.25
CCDC58-207ENST00000498466 TYRO3Q06418 890 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 MESDQ14696 234 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 SLC1A5Q15758 541 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 ODF2Q5BJF6 829 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 SARM1Q6SZW1 724 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 AMIGO1Q86WK6 493 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 C19orf47Q8N9M1 422 aaKnown RBP13.47□□□□□ -0.25
CCDC58-207ENST00000498466 IPMKQ8NFU5 416 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 OR52E1Q8NGJ3 308 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 DNAJB14Q8TBM8 379 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 HM13Q8TCT9 377 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 FAR1Q8WVX9 515 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 CNDP1Q96KN2 507 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 MRGPRX2Q96LB1 330 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 SPRTNQ9H040 489 aaPredicted RBP13.47□□□□□ -0.25
CCDC58-207ENST00000498466 TFB2MQ9H5Q4 396 aaKnown RBP13.47□□□□□ -0.25
CCDC58-207ENST00000498466 XKR8Q9H6D3 395 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms