RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 ZDHHC3Q9NYG2 299 aa17.71■□□□□ 0.43
ATPAF2-209ENST00000497871 VPS4AQ9UN37 437 aa17.71■□□□□ 0.43
ATPAF2-209ENST00000497871 SNX7Q9UNH6 387 aa17.71■□□□□ 0.43
ATPAF2-209ENST00000497871 SPENQ96T58 3664 aaKnown RBP17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 IGLV3-16A0A075B6K0 115 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 MACROD2A1Z1Q3 448 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 GSAPA4D1B5 854 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 IFRD1O00458 451 aaPredicted RBP17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 BTN3A3O00478 584 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 PJA2O43164 708 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 LDB2O43679 373 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 ZNF189O75820 626 aaPredicted RBP17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 RORAP35398 523 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 CYLC1P35663 651 aaPredicted RBP17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 CPZQ66K79 652 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 LCN10Q6JVE6 187 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 ZNF449Q6P9G9 518 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 KLHDC8BQ8IXV7 354 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 EFCAB3Q8N7B9 438 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 OR1L3Q8NH93 324 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 PSMG3-AS1Q96PY0 264 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 PITPNM3Q9BZ71 974 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 MVB12BQ9H7P6 319 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 VPS37BQ9H9H4 285 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 SERTAD3Q9UJW9 196 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 TCFL5Q9UL49 500 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 PCDHGB7Q9Y5F8 929 aa17.7■□□□□ 0.42
ATPAF2-209ENST00000497871 USP9YO00507 2555 aaPredicted RBP17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 TRBV5-4A0A0C4DH59 114 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 TMEM150CB9EJG8 249 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 TJP3O95049 919 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 MC4RP32245 332 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 CETN2P41208 172 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 RWDD2BP57060 319 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 ABRQ12979 859 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 CHAF1BQ13112 559 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 RPA4Q13156 261 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 SPARCL1Q14515 664 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 ZNF658BQ4V348 819 aaPredicted RBP17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 ZNF789Q5FWF6 425 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 SARM1Q6SZW1 724 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 ENDOVQ8N8Q3 282 aaKnown RBP17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 GALNT11Q8NCW6 608 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 PHC3Q8NDX5 983 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 OR52E1Q8NGJ3 308 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 CPT1CQ8TCG5 803 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 TRIM5Q9C035 493 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 ACTR5Q9H9F9 607 aaPredicted RBP17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 PCMTD2Q9NV79 361 aa17.69■□□□□ 0.42
ATPAF2-209ENST00000497871 H7C0S8 307 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 BTN3A1O00481 513 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 DDX3YO15523 660 aaKnown RBP17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 CEACAM4O75871 244 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 TMEM63AO94886 807 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 GSTM1P09488 218 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 ST6GAL1P15907 406 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 CYP2A7P20853 494 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 ACRV1P26436 265 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 PDHA2P29803 388 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 PTGIRP43119 386 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 CDKN1CP49918 316 aaPredicted RBP17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 GSTM4Q03013 218 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 PARP6Q2NL67 630 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 NADK2Q4G0N4 442 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 ZRANB3Q5FWF4 1079 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 SERPINA9Q86WD7 417 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 AMIGO1Q86WK6 493 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 RP1L1Q8IWN7 2480 aaPredicted RBP17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 TFGQ92734 400 aaPredicted RBP17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 TRAPPC9Q96Q05 1148 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 FAM118BQ9BPY3 351 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 DPH2Q9BQC3 489 aaPredicted RBP17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 ZNF451Q9Y4E5 1061 aa17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 EPN1Q9Y6I3 576 aaPredicted RBP17.68■□□□□ 0.42
ATPAF2-209ENST00000497871 USP9XQ93008 2570 aaPredicted RBP17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 C2orf74A8MZ97 194 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 CCL22O00626 93 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 CAPN1P07384 714 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 HBQ1P09105 142 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 NAP1L1P55209 391 aaKnown RBP17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 BOP1Q14137 746 aaKnown RBP17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 KCTD11Q693B1 232 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 MED25Q71SY5 747 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 TAS2R42Q7RTR8 314 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 SYTL1Q8IYJ3 562 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 TMEM102Q8N9M5 508 aaPredicted RBP17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 CDKN2AIPNLQ96HQ2 116 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 DNAJC1Q96KC8 554 aaKnown RBP17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 SLC7A5P2Q9GIP4 190 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 NLE1Q9NVX2 485 aaPredicted RBP17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 MAP4K5Q9Y4K4 846 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 DUSP10Q9Y6W6 482 aa17.67■□□□□ 0.42
ATPAF2-209ENST00000497871 RCCD1A6NED2 376 aa17.66■□□□□ 0.42
ATPAF2-209ENST00000497871 E7EQ34 232 aa17.66■□□□□ 0.42
ATPAF2-209ENST00000497871 AP2A2O94973 939 aa17.66■□□□□ 0.42
ATPAF2-209ENST00000497871 LMAN1P49257 510 aa17.66■□□□□ 0.42
ATPAF2-209ENST00000497871 VAV2P52735 878 aa17.66■□□□□ 0.42
ATPAF2-209ENST00000497871 ITGA1P56199 1179 aa17.66■□□□□ 0.42
ATPAF2-209ENST00000497871 PRKG2Q13237 762 aa17.66■□□□□ 0.42
ATPAF2-209ENST00000497871 AADACL2Q6P093 401 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms