RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 SLC32A1Q9H598 525 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 LRIT1Q9P2V4 623 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 PSMC3IPQ9P2W1 217 aaPredicted RBP11.62□□□□□ -0.55
CUX1-210ENST00000497815 SLC24A2Q9UI40 661 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 ZNF180Q9UJW8 692 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 ASF1AQ9Y294 204 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 NFS1Q9Y697 457 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 U3KQA8 63 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 UQCRHLA0A096LP55 91 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 TRIM49D1C9J1S8 452 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 SLC30A4O14863 429 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 PPM1DO15297 605 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 KRT37O76014 449 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 UQCRHP07919 91 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 NUDT17P0C025 328 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 CBSLP0DN79 551 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 CKMT1AP12532 417 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 CKMT2P17540 419 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 XRCC1P18887 633 aaPredicted RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 CD9P21926 228 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 ACADLP28330 430 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 ATP5DP30049 168 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 CBSP35520 551 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 RGS4P49798 205 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 SERPINB8P50452 374 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 DUSP3P51452 185 aaPredicted RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 IL2P60568 153 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 RAB10P61026 200 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 UBE2IP63279 158 aaKnown RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 PRKG2Q13237 762 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 GBX1Q14549 363 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 PERM1Q5SV97 790 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 BEND6Q5SZJ8 279 aaPredicted RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 LGSNQ5TDP6 509 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 ADGRD1Q6QNK2 874 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 EFL1Q7Z2Z2 1120 aaKnown RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 C17orf82Q86X59 251 aaPredicted RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 MYO1HQ8N1T3 1032 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 SPATA6LQ8N4H0 392 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 Q8N9G6 341 aaPredicted RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 OR5AR1Q8NGP9 310 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 BAHD1Q8TBE0 780 aaPredicted RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 CCDC74AQ96AQ1 378 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 FOPNLQ96NB1 174 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 CDC6Q99741 560 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 HGH1Q9BTY7 390 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 UNKQ9C0B0 810 aaKnown RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 STN1Q9H668 368 aaKnown RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 SNX15Q9NRS6 342 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 NCKIPSDQ9NZQ3 722 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 KLHL42Q9P2K6 505 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 FETUBQ9UGM5 382 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 CIDEBQ9UHD4 219 aa11.61□□□□□ -0.55
CUX1-210ENST00000497815 TDRKHQ9Y2W6 561 aaKnown RBP11.61□□□□□ -0.55
CUX1-210ENST00000497815 IQANK1A0A1B0GTG1 560 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 SPAARA0A1B0GVQ0 90 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 FOXO6A8MYZ6 492 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 ALDOAP04075 364 aaKnown RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 SNRPAP09012 282 aaKnown RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 ENO3P13929 434 aaPredicted RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 GLB1P16278 677 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 ZNF37AP17032 561 aaPredicted RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 CNTFP26441 200 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 TYK2P29597 1187 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 ALDH4A1P30038 563 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 MAPK9P45984 424 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 BDKRB1P46663 353 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 GPR18Q14330 331 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 PLCL1Q15111 1095 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 TRIP6Q15654 476 aaKnown RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 ZKSCAN8Q15776 578 aaPredicted RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 PPM1JQ5JR12 505 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 IFI44Q8TCB0 444 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 ANKRD49Q8WVL7 239 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 HNRNPLLQ8WVV9 542 aaKnown RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 SLC38A3Q99624 504 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 VPS11Q9H270 941 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 TRIT1Q9H3H1 467 aaKnown RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 SYNDIG1Q9H7V2 258 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 POPDC3Q9HBV1 291 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 SYTL2Q9HCH5 934 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 SLC40A1Q9NP59 571 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 POT1Q9NUX5 634 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 EVA1BQ9NVM1 165 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 ARGLU1Q9NWB6 273 aaPredicted RBP11.6□□□□□ -0.55
CUX1-210ENST00000497815 TLK1Q9UKI8 766 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 PLAGL1Q9UM63 463 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 HEBP2Q9Y5Z4 205 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 COLEC10Q9Y6Z7 277 aa11.6□□□□□ -0.55
CUX1-210ENST00000497815 A0A096LPK6 155 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 EME2A4GXA9 379 aaPredicted RBP11.59□□□□□ -0.55
CUX1-210ENST00000497815 KRT87PA6NCN2 255 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 RASGRF2O14827 1237 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 TM4SF5O14894 197 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 GIPC1O14908 333 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 CASC3O15234 703 aaKnown RBP11.59□□□□□ -0.55
CUX1-210ENST00000497815 TNFSF14O43557 240 aa11.59□□□□□ -0.55
CUX1-210ENST00000497815 NUDT21O43809 227 aaKnown RBP11.59□□□□□ -0.55
CUX1-210ENST00000497815 TSPAN12O95859 305 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms