RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 USP9XQ93008 2570 aaPredicted RBP12.59□□□□□ -0.39
FN1-226ENST00000496542 IGLV3-16A0A075B6K0 115 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 TRBV5-4A0A0C4DH59 114 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 C17orf113A0A1B0GUU1 675 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 TCRBV7S2A1N4TA0A589 114 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 SLC9B1P1A6NJY1 282 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 MIF4GDA9UHW6 222 aaKnown RBP12.59□□□□□ -0.39
FN1-226ENST00000496542 KIF5AQ12840 1032 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 DBN1Q16643 649 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 ZNF449Q6P9G9 518 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 PIANPQ8IYJ0 282 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 CARFQ8N187 725 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 CLDN19Q8N6F1 224 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 PHC3Q8NDX5 983 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 OR8K5Q8NH50 307 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 MR1Q95460 341 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 ZNF501Q96CX3 271 aaPredicted RBP12.59□□□□□ -0.39
FN1-226ENST00000496542 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 NRTNQ99748 197 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 HGH1Q9BTY7 390 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 OR52A5Q9H2C5 316 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 FANCEQ9HB96 536 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 KCND1Q9NSA2 647 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 NLE1Q9NVX2 485 aaPredicted RBP12.59□□□□□ -0.39
FN1-226ENST00000496542 BTRCQ9Y297 605 aa12.59□□□□□ -0.39
FN1-226ENST00000496542 SNRNP200O75643 2136 aaKnown RBP12.59□□□□□ -0.39
FN1-226ENST00000496542 TNRC6AQ8NDV7 1962 aaKnown RBP12.58□□□□□ -0.4
FN1-226ENST00000496542 TMEM150CB9EJG8 249 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 H7C0S8 307 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 K7EM74 188 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 MATN2O00339 956 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 BTN3A3O00478 584 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 BTN3A1O00481 513 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 AP2A1O95782 977 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 PTPN4P29074 926 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 PDHA2P29803 388 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 PMS2P54278 862 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 RPS15P62841 145 aaKnown RBP12.58□□□□□ -0.4
FN1-226ENST00000496542 CACNG1Q06432 222 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 GPS2Q13227 327 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 PRKG2Q13237 762 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 KLF1Q13351 362 aaPredicted RBP12.58□□□□□ -0.4
FN1-226ENST00000496542 ZNF658BQ4V348 819 aaPredicted RBP12.58□□□□□ -0.4
FN1-226ENST00000496542 CCDC38Q502W7 563 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 PRAMEF17Q5VTA0 474 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 TMEM139Q8IV31 216 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 TXLNBQ8N3L3 684 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 OR52E1Q8NGJ3 308 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 SLC35B2Q8TB61 432 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 STYXQ8WUJ0 223 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 ATG4AQ8WYN0 398 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 CDKN2AIPNLQ96HQ2 116 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 GPR87Q9BY21 358 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 KLHL25Q9H0H3 589 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 XKR8Q9H6D3 395 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 C1GALT1Q9NS00 363 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 SMARCAL1Q9NZC9 954 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 TLK1Q9UKI8 766 aa12.58□□□□□ -0.4
FN1-226ENST00000496542 USP9YO00507 2555 aaPredicted RBP12.57□□□□□ -0.4
FN1-226ENST00000496542 OR51F1A6NGY5 319 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 PSMD3O43242 534 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 DNAJB5O75953 348 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 AP2A2O94973 939 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 PVRP15151 417 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 ST6GAL1P15907 406 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 MSNP26038 577 aaKnown RBP12.57□□□□□ -0.4
FN1-226ENST00000496542 CD151P48509 253 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 LMAN1P49257 510 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 KLRB1Q12918 225 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 ABRQ12979 859 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 RPA4Q13156 261 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 IL10RAQ13651 578 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 IGFBP7Q16270 282 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 UGT8Q16880 541 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 TCTN3Q6NUS6 607 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 SPC24Q8NBT2 197 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 SLC38A9Q8NBW4 561 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 OR52K1Q8NGK4 314 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 CPT1BQ92523 772 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 TFGQ92734 400 aaPredicted RBP12.57□□□□□ -0.4
FN1-226ENST00000496542 CHST8Q9H2A9 424 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 MVB12BQ9H7P6 319 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 LATS2Q9NRM7 1088 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 PRSS21Q9Y6M0 314 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 CAPN6Q9Y6Q1 641 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 FER1L5A0AVI2 2057 aa12.57□□□□□ -0.4
FN1-226ENST00000496542 RELNP78509 3460 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 CCDC162PA2VCL2 907 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 MROH6A6NGR9 719 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 MAP3K7O43318 606 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 RECKO95980 971 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 IFNB1P01574 187 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 KLK3P07288 261 aaPredicted RBP12.56□□□□□ -0.4
FN1-226ENST00000496542 GSTM1P09488 218 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 CYP2A7P20853 494 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 PRDX3P30048 256 aaKnown RBP12.56□□□□□ -0.4
FN1-226ENST00000496542 GSDMDP57764 484 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 FOXK1P85037 733 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 GSTM4Q03013 218 aa12.56□□□□□ -0.4
FN1-226ENST00000496542 CHAF1BQ13112 559 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms