RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 ARHGAP6O43182 974 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 SUV39H1O43463 412 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 KALRNO60229 2985 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 ZIC2O95409 532 aaPredicted RBP12.39□□□□□ -0.43
PTPRF-214ENST00000496043 TIAF1O95411 115 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 FTH1P02794 183 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 NTRK1P04629 796 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 CDH3P22223 829 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 OAS2P29728 719 aaKnown RBP12.39□□□□□ -0.43
PTPRF-214ENST00000496043 PRDX3P30048 256 aaKnown RBP12.39□□□□□ -0.43
PTPRF-214ENST00000496043 PPARGP37231 505 aaPredicted RBP12.39□□□□□ -0.43
PTPRF-214ENST00000496043 ARCN1P48444 511 aaKnown RBP12.39□□□□□ -0.43
PTPRF-214ENST00000496043 PLOD1Q02809 727 aaPredicted RBP12.39□□□□□ -0.43
PTPRF-214ENST00000496043 KCNC4Q03721 635 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 ERV3-1Q14264 604 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 ZNF658BQ4V348 819 aaPredicted RBP12.39□□□□□ -0.43
PTPRF-214ENST00000496043 NLRP9Q7RTR0 991 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 CCDC89Q8N998 374 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 HDAC10Q969S8 669 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 RANBP9Q96S59 729 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 SYTL2Q9HCH5 934 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 RAB6BQ9NRW1 208 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 SOHLH2Q9NX45 425 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 PAK5Q9P286 719 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 RIMKLBQ9ULI2 386 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 DRG1Q9Y295 367 aaKnown RBP12.39□□□□□ -0.43
PTPRF-214ENST00000496043 PCDHGA6Q9Y5G7 932 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 PRSS21Q9Y6M0 314 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 ATMQ13315 3056 aa12.39□□□□□ -0.43
PTPRF-214ENST00000496043 PIPSLA2A3N6 862 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 GSAPA4D1B5 854 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 OR51F1A6NGY5 319 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 CREG1O75629 220 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 WISP1O95388 367 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 OR56A5P0C7T3 313 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 ETS1P14921 441 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 FOXN2P32314 431 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 PREPP48147 710 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 RPS15P62841 145 aaKnown RBP12.38□□□□□ -0.43
PTPRF-214ENST00000496043 NFKB2Q00653 900 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 PRKG2Q13237 762 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 SEMA5AQ13591 1074 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 DNASE1L3Q13609 305 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 BOP1Q14137 746 aaKnown RBP12.38□□□□□ -0.43
PTPRF-214ENST00000496043 GPR19Q15760 415 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 CCNG2Q16589 344 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 TSTD2Q5T7W7 516 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 ATP1A1-AS1Q5TC04 95 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 FBXO38Q6PIJ6 1188 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 C4orf22Q6V702 233 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 PACS1Q6VY07 963 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 MICALCLQ6ZW33 695 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 AMIGO1Q86WK6 493 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 TMEM126BQ8IUX1 230 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 OR52E1Q8NGJ3 308 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 CT55Q8WUE5 264 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 MAIP1Q8WWC4 291 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 ELMO1Q92556 727 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 ZNF501Q96CX3 271 aaPredicted RBP12.38□□□□□ -0.43
PTPRF-214ENST00000496043 PPM1MQ96MI6 270 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 GPR87Q9BY21 358 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 TWSG1Q9GZX9 223 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 FANCEQ9HB96 536 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 CASS4Q9NQ75 786 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 LATS2Q9NRM7 1088 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 POLG2Q9UHN1 485 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 SERTAD3Q9UJW9 196 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 POMT2Q9UKY4 750 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 POLHQ9Y253 713 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 BTRCQ9Y297 605 aa12.38□□□□□ -0.43
PTPRF-214ENST00000496043 C2orf74A8MZ97 194 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 BTN3A3O00478 584 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 BTN3A1O00481 513 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 CPNE3O75131 537 aaKnown RBP12.37□□□□□ -0.43
PTPRF-214ENST00000496043 SCRG1O75711 98 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 GOT2P00505 430 aaKnown RBP12.37□□□□□ -0.43
PTPRF-214ENST00000496043 KLK3P07288 261 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-214ENST00000496043 GRIA1P42261 906 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 BRD3Q15059 726 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 FASTKD1Q53R41 847 aaKnown RBP12.37□□□□□ -0.43
PTPRF-214ENST00000496043 FAM199XQ6PEV8 388 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-214ENST00000496043 AFTPHQ6ULP2 937 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 ZNF662Q6ZS27 426 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 PRUNE1Q86TP1 453 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 HOOK3Q86VS8 718 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 PTRH1Q86Y79 214 aaKnown RBP12.37□□□□□ -0.43
PTPRF-214ENST00000496043 TBC1D21Q8IYX1 336 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 OR13J1Q8NGT2 312 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 OR6P1Q8NGX9 317 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 OR4L1Q8NH43 312 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 C9orf43Q8TAL5 461 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-214ENST00000496043 SEC14L1Q92503 715 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 ABHD17AQ96GS6 310 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 SGSM3Q96HU1 749 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 XKR8Q9H6D3 395 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 AKIRIN1Q9H9L7 192 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-214ENST00000496043 LZTFL1Q9NQ48 299 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 SLC2A6Q9UGQ3 507 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 ANAPC5Q9UJX4 755 aa12.37□□□□□ -0.43
PTPRF-214ENST00000496043 FARSAQ9Y285 508 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms