RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 GABRB2P47870 512 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 PREPP48147 710 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 DRG2P55039 364 aaKnown RBP9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 PPP2R2BQ00005 443 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 LRRC63Q05C16 580 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 PTPRRQ15256 657 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 RAB6CQ53S08 254 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 TBCELQ5QJ74 424 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 ARMC12Q5T9G4 340 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 ABRAXAS1Q6UWZ7 409 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 ARCQ7LC44 396 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 EID3Q8N140 333 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 AFAP1L2Q8N4X5 818 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 FAM169BQ8N8A8 192 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 WFDC11Q8NEX6 87 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 OR1L3Q8NH93 324 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 NTAN1Q96AB6 310 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 NACC2Q96BF6 587 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 THOC3Q96J01 351 aaKnown RBP9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 PSKH2Q96QS6 385 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 LMF1Q96S06 567 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 RAB6CQ9H0N0 254 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 OR2AG1Q9H205 316 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 LRRC19Q9H756 370 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 NPHS2Q9NP85 383 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 HRASLS2Q9NWW9 162 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 TRIM10Q9UDY6 481 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 CDC23Q9UJX2 597 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 TMEM59LQ9UK28 342 aa9.3□□□□□ -0.92
SMARCAL1-213ENST00000496037 PCM1Q15154 2024 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 A0A1B0GVL5 298 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 KMOO15229 486 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 ZNF749O43361 778 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 VEGFDO43915 354 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 PRAMEF2O60811 474 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 PGLSO95336 258 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 BRAFP15056 766 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 VCLP18206 1134 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 CDH3P22223 829 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 UGT1A4P22310 534 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 TNFSF10P50591 281 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 PAPOLAP51003 745 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 POU4F2Q12837 409 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 TRAF2Q12933 501 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 LONRF2Q1L5Z9 754 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 C2CD6Q53TS8 623 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 ZNF789Q5FWF6 425 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 AGAP9Q5VTM2 703 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 ZNF385CQ66K41 422 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 WASH2PQ6VEQ5 465 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 NCCRP1Q6ZVX7 275 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 STRADAQ7RTN6 431 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 SLFN11Q7Z7L1 901 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 GPR135Q8IZ08 494 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 PYROXD2Q8N2H3 581 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 TAB3Q8N5C8 712 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 ACRBPQ8NEB7 543 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 PHF10Q8WUB8 498 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 VPS50Q96JG6 964 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 NSMCE3Q96MG7 304 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 FERD3LQ96RJ6 166 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 TIMM29Q9BSF4 260 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 POLDIP3Q9BY77 421 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 ETNK1Q9HBU6 452 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 ATXN10Q9UBB4 475 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 DNPEPQ9ULA0 475 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 CNOT6Q9ULM6 557 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 PPT2Q9UMR5 302 aa9.29□□□□□ -0.92
SMARCAL1-213ENST00000496037 MXRA5Q9NR99 2828 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 FADS2P1A8MWK0 482 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 DFFAO00273 331 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 PROM1O43490 865 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 MLYCDO95822 493 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 UMODP07911 640 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 UQCRHP07919 91 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 TPM2P07951 284 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 UNGP13051 313 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 ZNF7P17097 686 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 MMP11P24347 488 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 HSPA9P38646 679 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 PRCPP42785 496 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 STC1P52823 247 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 PMS1P54277 932 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 FOXL2P58012 376 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 TPI1P60174 286 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 DCDP81605 110 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 LBRQ14739 615 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 SLC9A5Q14940 896 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 C21orf62-AS1Q17RA5 79 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 TUBB8Q3ZCM7 444 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 CCDC14Q49A88 953 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 C1orf189Q5VU69 101 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 GJB7Q6PEY0 223 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 FBXO38Q6PIJ6 1188 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 RINLQ6ZS11 566 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 CAMKMTQ7Z624 323 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 ZBTB46Q86UZ6 589 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 LRRTM4Q86VH4 590 aa9.28□□□□□ -0.92
SMARCAL1-213ENST00000496037 TREML1Q86YW5 311 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms