RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 ACY1Q03154 408 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 ACVR1Q04771 509 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 PRKAA1Q13131 559 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 RPA4Q13156 261 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 SEMA3AQ14563 771 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 GPR19Q15760 415 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 AFTPHQ6ULP2 937 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 PACS1Q6VY07 963 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 KMT5CQ86Y97 462 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 ELMO1Q92556 727 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 TFGQ92734 400 aaPredicted RBP13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 HGH1Q9BTY7 390 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 SRMSQ9H3Y6 488 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 XKR8Q9H6D3 395 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 AKIRIN1Q9H9L7 192 aaPredicted RBP13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 STARD5Q9NSY2 213 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 GEMIN8Q9NWZ8 242 aaKnown RBP13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 POMT2Q9UKY4 750 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 TCAF1Q9Y4C2 921 aa13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 HELZ2Q9BYK8 2649 aaKnown RBP13.85□□□□□ -0.19
RPRD1B-206ENST00000495457 SLC9B1P1A6NJY1 282 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 BTN3A1O00481 513 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 KATNA1O75449 491 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 FTH1P02794 183 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 TCN2P20062 427 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 CDH3P22223 829 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 POLE2P56282 527 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 SESN2P58004 480 aaPredicted RBP13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 CRADDP78560 199 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 BOP1Q14137 746 aaKnown RBP13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 DEFB109BQ30KR1 87 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 PRAMEF17Q5VTA0 474 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 ZNF449Q6P9G9 518 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 DRICH1Q6PGQ1 229 aaPredicted RBP13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 LDB1Q86U70 411 aaPredicted RBP13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 TRIM58Q8NG06 486 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 OR5AR1Q8NGP9 310 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 OR6P1Q8NGX9 317 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 OR4L1Q8NH43 312 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.84□□□□□ -0.197e-7■■■■■ 41.8
RPRD1B-206ENST00000495457 CATSPER2Q96P56 530 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 RUFY1Q96T51 708 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 TFB2MQ9H5Q4 396 aaKnown RBP13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 MVB12BQ9H7P6 319 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 LHX9Q9NQ69 397 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 CHRAC1Q9NRG0 131 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 SOHLH2Q9NX45 425 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 RIMKLBQ9ULI2 386 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 DRG1Q9Y295 367 aaKnown RBP13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 COL6A6A6NMZ7 2263 aa13.84□□□□□ -0.19
RPRD1B-206ENST00000495457 SLC5A10A0PJK1 596 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 BHMG1C9JSJ3 638 aaPredicted RBP13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 J3QKU1 62 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 QSOX1O00391 747 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 LIN7AO14910 233 aaPredicted RBP13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 SLC28A2O43868 658 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 CEP104O60308 925 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 GSTM1P09488 218 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 FURINP09958 794 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 OR56A5P0C7T3 313 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 CCNYL3P0C7X3 344 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 PVRP15151 417 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 ST6GAL1P15907 406 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 ACADLP28330 430 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 PRDX3P30048 256 aaKnown RBP13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 CCR10P46092 362 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 CSE1LP55060 971 aaKnown RBP13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 TUBB4BP68371 445 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 PRAMEP78395 509 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 BASP1P80723 227 aaKnown RBP13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 GSTM4Q03013 218 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 LAMB3Q13751 1172 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 TUBB2AQ13885 445 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 CYB5D1Q6P9G0 228 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 FAM199XQ6PEV8 388 aaPredicted RBP13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 GSTA5Q7RTV2 222 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 PRICKLE2Q7Z3G6 844 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 AMIGO1Q86WK6 493 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 PPHLN1Q8NEY8 458 aaKnown RBP13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 LKAAEAR1Q8TD35 194 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 CT55Q8WUE5 264 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 ZNF501Q96CX3 271 aaPredicted RBP13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 FCRL4Q96PJ5 515 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 TUBB2BQ9BVA1 445 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 KLHL25Q9H0H3 589 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 SLC25A18Q9H1K4 315 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 C1GALT1Q9NS00 363 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 PADI1Q9ULC6 663 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 ICKQ9UPZ9 632 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 ASF1AQ9Y294 204 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 BTRCQ9Y297 605 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 ZKSCAN5Q9Y2L8 839 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 PPP2R2CQ9Y2T4 447 aa13.83□□□□□ -0.2
RPRD1B-206ENST00000495457 BSNQ9UPA5 3926 aa13.82□□□□□ -0.2
RPRD1B-206ENST00000495457 IQCF5A8MTL0 148 aa13.82□□□□□ -0.2
RPRD1B-206ENST00000495457 MATN2O00339 956 aa13.82□□□□□ -0.2
RPRD1B-206ENST00000495457 SCRG1O75711 98 aa13.82□□□□□ -0.2
RPRD1B-206ENST00000495457 MT-ND3P03897 115 aa13.82□□□□□ -0.2
RPRD1B-206ENST00000495457 TPBGLP0DKB5 382 aa13.82□□□□□ -0.2
RPRD1B-206ENST00000495457 SFTPCP11686 197 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms