RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 TUBB4BP68371 445 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 SHC2P98077 582 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 ILF2Q12905 390 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 ISXQ2M1V0 245 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 PHF19Q5T6S3 580 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 DUS1LQ6P1R4 473 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 TTC23LQ6PF05 361 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 SLC26A11Q86WA9 606 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 PLXDC1Q8IUK5 500 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 SLC22A15Q8IZD6 547 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 PHC3Q8NDX5 983 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 ACVR1CQ8NER5 493 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 CFAP61Q8NHU2 1237 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 KCNJ9Q92806 393 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 AARSD1Q9BTE6 412 aaKnown RBP11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 KIR3DX1Q9H7L2 352 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 PLAC1Q9HBJ0 212 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 TAS2R13Q9NYV9 303 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 AKAP7Q9P0M2 348 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 POLG2Q9UHN1 485 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 CORO1CQ9ULV4 474 aaPredicted RBP11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 MSRB2Q9Y3D2 182 aa11.79□□□□□ -0.52
CSNK1E-213ENST00000495232 UNC13CQ8NB66 2214 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 TCRBV9S1A1TA0A576 114 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 BHMG1C9JSJ3 638 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 SKIV2L2P42285 1042 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 ABRQ12979 859 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 PRKG2Q13237 762 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 SQSTM1Q13501 440 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 ARMC6Q6NXE6 501 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 TMEM71Q6P5X7 295 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 WDR74Q6RFH5 385 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 XKR5Q6UX68 686 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 CCNI2Q6ZMN8 369 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 CYS1Q717R9 158 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 STRA8Q7Z7C7 330 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 CTAGE3PQ8IX95 158 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 TBC1D21Q8IYX1 336 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 GPATCH11Q8N954 259 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 OR4D9Q8NGE8 314 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 OR5K2Q8NHB8 316 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 LCN9Q8WX39 176 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 INPP5DQ92835 1189 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 ATXN7L3BQ96GX2 97 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 NDNQ99608 321 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 HGH1Q9BTY7 390 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 LRRC4CQ9HCJ2 640 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 LATS2Q9NRM7 1088 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 KLHL42Q9P2K6 505 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 SLC17A6Q9P2U8 582 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 SLC24A2Q9UI40 661 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 TRMT6Q9UJA5 497 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 NFU1Q9UMS0 254 aa11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 TDRKHQ9Y2W6 561 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-213ENST00000495232 FAM221BA6H8Z2 402 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 CASC3O15234 703 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 SLU7O95391 586 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 ACADLP28330 430 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 ATP5DP30049 168 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 RGS4P49798 205 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 CLCN7P51798 805 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 PRKAA1Q13131 559 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 PDAP1Q13442 181 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 SLMAPQ14BN4 828 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 SNAP47Q5SQN1 464 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 FAM45BPQ6NSW5 357 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 ZNF549Q6P9A3 640 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 UNC5DQ6UXZ4 953 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 OOSP2Q86WS3 158 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 MARCH9Q86YJ5 346 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 VRK3Q8IV63 474 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 RAB42Q8N4Z0 105 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 SIDT2Q8NBJ9 832 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 LRRN4CLQ8ND94 238 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 OR4E2Q8NGC2 313 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 OR5AR1Q8NGP9 310 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 FAM45AQ8TCE6 357 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 MAGEC3Q8TD91 643 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 JPH3Q8WXH2 748 aaPredicted RBP11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 ZDHHC12Q96GR4 267 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 GPR21Q99679 349 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 CPNE1Q99829 537 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 NUDT22Q9BRQ3 303 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 SRMSQ9H3Y6 488 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 HRASLS2Q9NWW9 162 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 TSR3Q9UJK0 312 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 WASF3Q9UPY6 502 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 CDYLQ9Y232 598 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 DHRS7Q9Y394 339 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 ENTPD2Q9Y5L3 495 aa11.77□□□□□ -0.53
CSNK1E-213ENST00000495232 CAPN5O15484 640 aaPredicted RBP11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 RASSF9O75901 435 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 CBSLP0DN79 551 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 ENO3P13929 434 aaPredicted RBP11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 SAT1P21673 171 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 MPSTP25325 297 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 GABRB3P28472 473 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 CCKBRP32239 447 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 SHMT2P34897 504 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms