RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 OR52A5Q9H2C5 316 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 TFB2MQ9H5Q4 396 aaKnown RBP22.57■■□□□ 1.2
COL27A1-208ENST00000494780 VPS37BQ9H9H4 285 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 SNX7Q9UNH6 387 aa22.57■■□□□ 1.2
COL27A1-208ENST00000494780 COL12A1Q99715 3063 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 IGLV3-16A0A075B6K0 115 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 TTLL8A6PVC2 850 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 MAP3K7O43318 606 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 LDB2O43679 373 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 PRDX3P30048 256 aaKnown RBP22.56■■□□□ 1.2
COL27A1-208ENST00000494780 MC4RP32245 332 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 RORAP35398 523 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 CETN2P41208 172 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 PREPP48147 710 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 CHAF1BQ13112 559 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 ZNF658BQ4V348 819 aaPredicted RBP22.56■■□□□ 1.2
COL27A1-208ENST00000494780 PRAMEF17Q5VTA0 474 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 PAPD7Q5XG87 772 aaKnown RBP22.56■■□□□ 1.2
COL27A1-208ENST00000494780 ZNF449Q6P9G9 518 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 SARM1Q6SZW1 724 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 KLHDC8BQ8IXV7 354 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 EFCAB3Q8N7B9 438 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 ENDOVQ8N8Q3 282 aaKnown RBP22.56■■□□□ 1.2
COL27A1-208ENST00000494780 OR1L3Q8NH93 324 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 MVB12BQ9H7P6 319 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 PCDHGB7Q9Y5F8 929 aa22.56■■□□□ 1.2
COL27A1-208ENST00000494780 TRBV5-4A0A0C4DH59 114 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 TMEM150CB9EJG8 249 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 BTN3A3O00478 584 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 BTN3A1O00481 513 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 VPS4BO75351 444 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 TJP3O95049 919 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 ST6GAL1P15907 406 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 CYP2A7P20853 494 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 PTGIRP43119 386 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 RWDD2BP57060 319 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 RPA4Q13156 261 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 SPARCL1Q14515 664 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 ZNF789Q5FWF6 425 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 LCN10Q6JVE6 187 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 GALNT11Q8NCW6 608 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 OR52E1Q8NGJ3 308 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 PSMG3-AS1Q96PY0 264 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 FAM118BQ9BPY3 351 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 TRIM5Q9C035 493 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 ACTR5Q9H9F9 607 aaPredicted RBP22.55■■□□□ 1.2
COL27A1-208ENST00000494780 PCMTD2Q9NV79 361 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 SERTAD3Q9UJW9 196 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 TCFL5Q9UL49 500 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 VPS4AQ9UN37 437 aa22.55■■□□□ 1.2
COL27A1-208ENST00000494780 USP9YO00507 2555 aaPredicted RBP22.55■■□□□ 1.2
COL27A1-208ENST00000494780 H7C0S8 307 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 CCL22O00626 93 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 DDX3YO15523 660 aaKnown RBP22.54■■□□□ 1.2
COL27A1-208ENST00000494780 CEACAM4O75871 244 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 GSTM1P09488 218 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 ACRV1P26436 265 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 GSTM4Q03013 218 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 ZRANB3Q5FWF4 1079 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 SERPINA9Q86WD7 417 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 CPT1CQ8TCG5 803 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 DNAJC1Q96KC8 554 aaKnown RBP22.54■■□□□ 1.2
COL27A1-208ENST00000494780 ZNF451Q9Y4E5 1061 aa22.54■■□□□ 1.2
COL27A1-208ENST00000494780 USP9XQ93008 2570 aaPredicted RBP22.53■■□□□ 1.2
COL27A1-208ENST00000494780 TNRC6AQ8NDV7 1962 aaKnown RBP22.53■■□□□ 1.2
COL27A1-208ENST00000494780 C2orf74A8MZ97 194 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 TMEM63AO94886 807 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 CAPN1P07384 714 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 PDHA2P29803 388 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 CDKN1CP49918 316 aaPredicted RBP22.53■■□□□ 1.2
COL27A1-208ENST00000494780 NADK2Q4G0N4 442 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 KCTD11Q693B1 232 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 AMIGO1Q86WK6 493 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 SYTL1Q8IYJ3 562 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 PHC3Q8NDX5 983 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 TRAPPC9Q96Q05 1148 aa22.53■■□□□ 1.2
COL27A1-208ENST00000494780 DPH2Q9BQC3 489 aaPredicted RBP22.53■■□□□ 1.2
COL27A1-208ENST00000494780 NLE1Q9NVX2 485 aaPredicted RBP22.53■■□□□ 1.2
COL27A1-208ENST00000494780 EPN1Q9Y6I3 576 aaPredicted RBP22.53■■□□□ 1.2
COL27A1-208ENST00000494780 RCCD1A6NED2 376 aa22.52■■□□□ 1.2
COL27A1-208ENST00000494780 LMAN1P49257 510 aa22.52■■□□□ 1.2
COL27A1-208ENST00000494780 VAV2P52735 878 aa22.52■■□□□ 1.2
COL27A1-208ENST00000494780 NAP1L1P55209 391 aaKnown RBP22.52■■□□□ 1.2
COL27A1-208ENST00000494780 ITGA1P56199 1179 aa22.52■■□□□ 1.2
COL27A1-208ENST00000494780 BOP1Q14137 746 aaKnown RBP22.52■■□□□ 1.2
COL27A1-208ENST00000494780 PARP6Q2NL67 630 aa22.52■■□□□ 1.2
COL27A1-208ENST00000494780 FAM198BQ6UWH4 519 aa22.52■■□□□ 1.2
COL27A1-208ENST00000494780 TAS2R42Q7RTR8 314 aa22.52■■□□□ 1.2
COL27A1-208ENST00000494780 TFGQ92734 400 aaPredicted RBP22.52■■□□□ 1.2
COL27A1-208ENST00000494780 SLC7A5P2Q9GIP4 190 aa22.52■■□□□ 1.2
COL27A1-208ENST00000494780 G3BP2Q9UN86 482 aaKnown RBP22.52■■□□□ 1.2
COL27A1-208ENST00000494780 MED13Q9UHV7 2174 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 BLACEA4D250 179 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 BTNL10A8MVZ5 291 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 E7EQ34 232 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 SORBS2O94875 1100 aaKnown RBP22.51■■□□□ 1.19
COL27A1-208ENST00000494780 AP2A2O94973 939 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 HBQ1P09105 142 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 CACNG1Q06432 222 aa22.51■■□□□ 1.19
COL27A1-208ENST00000494780 AADACL2Q6P093 401 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 1201.8 ms