RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 P2RY12Q9H244 342 aa22.02■■□□□ 1.12
SNIP1-203ENST00000493916 APMAPQ9HDC9 416 aa22.02■■□□□ 1.12
SNIP1-203ENST00000493916 SAR1BQ9Y6B6 198 aa22.02■■□□□ 1.12
SNIP1-203ENST00000493916 PIKFYVEQ9Y2I7 2098 aa22.02■■□□□ 1.11
SNIP1-203ENST00000493916 IGHV5-51A0A0C4DH38 117 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 FAM237BA0A1B0GVD1 139 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 MAGEB16A2A368 324 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 SDR42E2A6NKP2 422 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 BHMG1C9JSJ3 638 aaPredicted RBP22.01■■□□□ 1.11
SNIP1-203ENST00000493916 MATN2O00339 956 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 PAMP19021 973 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 RPS3P23396 243 aaKnown RBP eCLIP22.01■■□□□ 1.11
SNIP1-203ENST00000493916 CCR7P32248 378 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 ARCN1P48444 511 aaKnown RBP22.01■■□□□ 1.11
SNIP1-203ENST00000493916 PTK6Q13882 451 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 TYSND1Q2T9J0 566 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 RNF187Q5TA31 235 aaPredicted RBP22.01■■□□□ 1.11
SNIP1-203ENST00000493916 RNASEH2BQ5TBB1 312 aaKnown RBP22.01■■□□□ 1.11
SNIP1-203ENST00000493916 ARMC6Q6NXE6 501 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 CASC4Q6P4E1 433 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 PPIL6Q8IXY8 311 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 OR4E2Q8NGC2 313 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 LKAAEAR1Q8TD35 194 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 SPRY4Q9C004 299 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 SRMSQ9H3Y6 488 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 KCND1Q9NSA2 647 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 GNPTGQ9UJJ9 305 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 SDK2Q58EX2 2172 aa22.01■■□□□ 1.11
SNIP1-203ENST00000493916 MGAQ8IWI9 3026 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 CTAGE9A4FU28 777 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 GOLGA8MH3BSY2 632 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 NDUFS3O75489 264 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 ATP1A2P50993 1020 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 SH3BP2P78314 561 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 IL11RAQ14626 422 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 BRD3Q15059 726 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 MANEAQ5SRI9 462 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 ARHGAP40Q5TG30 622 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 CYB5D1Q6P9G0 228 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 NAPRTQ6XQN6 538 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 SLC22A15Q8IZD6 547 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 PHC3Q8NDX5 983 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 OR52E1Q8NGJ3 308 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 NKD1Q969G9 470 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 CAPZA3Q96KX2 299 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 UBL7Q96S82 380 aaPredicted RBP22■■□□□ 1.11
SNIP1-203ENST00000493916 TCF12Q99081 682 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 MAP3K3Q99759 626 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 HGH1Q9BTY7 390 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 PILRAQ9UKJ1 303 aa22■■□□□ 1.11
SNIP1-203ENST00000493916 TMEM184BQ9Y519 407 aaPredicted RBP22■■□□□ 1.11
SNIP1-203ENST00000493916 AHCTF1Q8WYP5 2266 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 EFSO43281 561 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 GPC4O75487 556 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 ITGB6P18564 788 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 OGNP20774 298 aaKnown RBP21.99■■□□□ 1.11
SNIP1-203ENST00000493916 KPNA2P52292 529 aaKnown RBP21.99■■□□□ 1.11
SNIP1-203ENST00000493916 FOXM1Q08050 763 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 PRKAA1Q13131 559 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 ANKRD20A4Q4UJ75 823 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 PTRHD1Q6GMV3 140 aaKnown RBP21.99■■□□□ 1.11
SNIP1-203ENST00000493916 SDCCAG8Q86SQ7 713 aaPredicted RBP21.99■■□□□ 1.11
SNIP1-203ENST00000493916 TMEM135Q86UB9 458 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 TBC1D21Q8IYX1 336 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 OTUD6BQ8N6M0 293 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 OR5AR1Q8NGP9 310 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 OR5K2Q8NHB8 316 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 ASZ1Q8WWH4 475 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 RUNDC3BQ96NL0 473 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 PANX3Q96QZ0 392 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 OR6C1Q96RD1 312 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 TRIT1Q9H3H1 467 aaKnown RBP21.99■■□□□ 1.11
SNIP1-203ENST00000493916 ASIC3Q9UHC3 531 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 POLG2Q9UHN1 485 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 POMT2Q9UKY4 750 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 CDYLQ9Y232 598 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 ASF1AQ9Y294 204 aa21.99■■□□□ 1.11
SNIP1-203ENST00000493916 UBA6A0AVT1 1052 aaPredicted RBP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 IQCF5A8MTL0 148 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 PFDN6O15212 129 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 RAD1O60671 282 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 APOA4P06727 396 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 POLR2CP19387 275 aaPredicted RBP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 AOAHP28039 575 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 PTGIRP43119 386 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 ADARP55265 1226 aaKnown RBP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 SRSF6Q13247 344 aaKnown RBP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 TMED2Q15363 201 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 DNAJC21Q5F1R6 531 aaKnown RBP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 SYDE1Q6ZW31 735 aaPredicted RBP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 VASH2Q86V25 355 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 AMIGO1Q86WK6 493 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 AGGF1Q8N302 714 aaeCLIP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 SIDT2Q8NBJ9 832 aaKnown RBP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 LPGAT1Q92604 370 aa21.98■■□□□ 1.11
SNIP1-203ENST00000493916 TRIM56Q9BRZ2 755 aaKnown RBP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.98■■□□□ 1.11
SNIP1-203ENST00000493916 ZCWPW2A0A1B0GU75 182 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 GOLGA8KD6RF30 607 aa21.97■■□□□ 1.11
SNIP1-203ENST00000493916 GOLGA8TH3BQL2 631 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms