RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ERVK-18Q9QC07 812 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 FBXW2Q9UKT8 454 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CFL2Q9Y281 166 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 WDR37Q9Y2I8 494 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 ZNF521Q96K83 1311 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 DNMT1P26358 1616 aaKnown RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 A0A0J9YVX5 310 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 B3GALT2O43825 422 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 PIRTP0C851 137 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 NR2C1P13056 603 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 POU2F1P14859 743 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 UQCRC1P31930 480 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 GRIA1P42261 906 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 AIF1P55008 147 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 OR12D2P58182 307 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 TARDBPQ13148 414 aaKnown RBP eCLIP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 PON3Q15166 354 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 ASTE1Q2TB18 679 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CPNE9Q8IYJ1 553 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MREGQ8N565 214 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 OXR1Q8N573 874 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 OR5K1Q8NHB7 308 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MIPEPQ99797 713 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MRPL45Q9BRJ2 306 aaKnown RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MECRQ9BV79 373 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 PCDH18Q9HCL0 1135 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MAB21L2Q9Y586 359 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 ARPC4-TTLL3A0A0A6YYG9 625 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 A0A1B0GVM2 712 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 TCAF2A6NFQ2 919 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 M0QX08 132 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 EML1O00423 815 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CXCR6O00574 342 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 TNFRSF10BO14763 440 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 IFNA4P05014 189 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 HMGN1P05114 100 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 NUDT17P0C025 328 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CPN2P22792 545 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CRHR1P34998 444 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 YAP1P46937 504 aaKnown RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 LUMP51884 338 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CACNG1Q06432 222 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 DSG2Q14126 1118 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 PLEKHN1Q494U1 663 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 WSCD1Q658N2 575 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 GALNT13Q8IUC8 556 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CREG2Q8IUH2 290 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CPA6Q8N4T0 437 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 POGLUT1Q8NBL1 392 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 PNPLA2Q96AD5 504 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 TCEAL4Q96EI5 215 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MTMR9Q96QG7 549 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 TBX5Q99593 518 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 DHX33Q9H6R0 707 aaKnown RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 LRRC19Q9H756 370 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 SLC39A1Q9NY26 324 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CPA4Q9UI42 421 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 WASF2Q9Y6W5 498 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 EPHB6O15197 1021 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 HSPA12AO43301 675 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 STK16O75716 305 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 IFNA5P01569 189 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 E2F1Q01094 437 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 SLC20A2Q08357 652 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 IL23RQ5VWK5 629 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 SAMD7Q7Z3H4 446 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 OR14K1Q8NGZ2 314 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 SUN3Q8TAQ9 357 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 LRTOMTQ8WZ04 291 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 GSKIPQ9P0R6 139 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MAGI2Q86UL8 1455 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 HTR3EA5X5Y0 456 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 OR6C6A6NF89 314 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 OTOL1A6NHN0 477 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 KCNU1A8MYU2 1149 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 ZNF670-ZNF695F2Z2N8 137 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 AURKAO14965 403 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 TPST2O60704 377 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 APODP05090 189 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 IL7RP16871 459 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MSX2P35548 267 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CLCN4P51793 760 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 GNG2P59768 71 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MAXP61244 160 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 DDR1Q08345 913 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 TRIM28Q13263 835 aaKnown RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 ZNF517Q6ZMY9 492 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 MARCH9Q86YJ5 346 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 LNX2Q8N448 690 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 LIX1Q8N485 282 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 C2orf73Q8N5S3 287 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 FBXO15Q8NCQ5 510 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 BORCS7Q96B45 105 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CREB3L1Q96BA8 519 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 ADAD1Q96M93 576 aaKnown RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 PDCD2LQ9BRP1 358 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 UNC93B1Q9H1C4 597 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 RIMKLBQ9ULI2 386 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 TLL2Q9Y6L7 1015 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CCDC163A0A0D9SF12 145 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms