RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 DCDP81605 110 aaKnown RBP13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 PCSK7Q16549 785 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 ZNF630Q2M218 657 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 GPRC6AQ5T6X5 926 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 AGAP7PQ5VUJ5 663 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 PRAMEF13Q5VWM6 474 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 CCDC70Q6NSX1 233 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 CDHR3Q6ZTQ4 885 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 MAP7D3Q8IWC1 876 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 ZNF808Q8N4W9 903 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 BCORP1Q8N888 145 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 BTBD6Q96KE9 485 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 LINC00615Q96LM1 132 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 RMDN2Q96LZ7 410 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 AGAP4Q96P64 663 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 CHRNA10Q9GZZ6 450 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 SRMSQ9H3Y6 488 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 OLAHQ9NV23 265 aa13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 IFT80Q9P2H3 777 aaPredicted RBP13.78□□□□□ -0.2
PRPF40A-211ENST00000493468 GLYATL1P3A0A0U1RQE8 302 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 BTN3A1O00481 513 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 PCDH17O14917 1159 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 CNOT3O75175 753 aaKnown RBP13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 JRKO75564 520 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 COX6B1P14854 86 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 TDGF1P3P51864 188 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 PPP2R5EQ16537 467 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 BCL7AQ4VC05 210 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 FNBP1LQ5T0N5 605 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 E4F1Q66K89 784 aaPredicted RBP13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 ZNF324BQ6AW86 544 aaPredicted RBP13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 MTFR2Q6P444 385 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 FAM151BQ6UXP7 276 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 RPTNQ6XPR3 784 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 PARP9Q8IXQ6 854 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 KCTD6Q8NC69 237 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 LCN9Q8WX39 176 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 CCM2Q9BSQ5 444 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 EPS8L2Q9H6S3 715 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 SLC6A20Q9NP91 592 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 IL17CQ9P0M4 197 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 SUCOQ9UBS9 1254 aaKnown RBP13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 FBXL4Q9UKA2 621 aa13.77□□□□□ -0.21
PRPF40A-211ENST00000493468 NCOA6Q14686 2063 aaPredicted RBP13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 C2orf74A8MZ97 194 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 MYO1FO00160 1098 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 MASP2O00187 686 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 BTN3A3O00478 584 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 GAPDHSO14556 408 aaPredicted RBP13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 GPR39O43194 453 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 UGT1A9O60656 530 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 OR2B3O76000 313 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 UGT1A6P19224 532 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 MSH3P20585 1137 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 UGT1A1P22309 533 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 UGT1A4P22310 534 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 MMP11P24347 488 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 HTR1EP28566 365 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 GABRA4P48169 554 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 MYL5Q02045 173 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 KLHL30Q0D2K2 578 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 KRT33BQ14525 404 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 GSE1Q14687 1217 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 INAQ16352 499 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 ATP13A4Q4VNC1 1196 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 IRAK1BP1Q5VVH5 260 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 POM121Q96HA1 1249 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 THAP2Q9H0W7 228 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 TFB2MQ9H5Q4 396 aaKnown RBP13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 UGT1A7Q9HAW7 530 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 UGT1A10Q9HAW8 530 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 UGT1A8Q9HAW9 530 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 HACD3Q9P035 362 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 ITGB1BP2Q9UKP3 347 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 CDYLQ9Y232 598 aa13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 SNRNP200O75643 2136 aaKnown RBP13.76□□□□□ -0.21
PRPF40A-211ENST00000493468 CACNA1CQ13936 2221 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 ZNF487B1APH4 448 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 ZSCAN9O15535 394 aaPredicted RBP13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 MT-CYBP00156 380 aaPredicted RBP13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 CYP1A2P05177 515 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 PVRP15151 417 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 CAPN3P20807 821 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 CDK11BP21127 795 aaKnown RBP13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 SSTR2P30874 369 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 AKT1P31749 480 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 SSR1P43307 286 aaKnown RBP13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 NKAIN1Q4KMZ8 207 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 C1orf189Q5VU69 101 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 PLD5Q8N7P1 536 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 C19orf47Q8N9M1 422 aaKnown RBP13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 SPATA22Q8NHS9 363 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 HM13Q8TCT9 377 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 N4BP2L2Q92802 583 aaPredicted RBP13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.75□□□□□ -0.211e-6■■■□□ 17.7
PRPF40A-211ENST00000493468 FKBP10Q96AY3 582 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 CCDC120Q96HB5 630 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 CNDP1Q96KN2 507 aa13.75□□□□□ -0.21
PRPF40A-211ENST00000493468 CEP41Q9BYV8 373 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms