RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 TIMP3P35625 211 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 GNL1P36915 607 aaPredicted RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 PSMC4P43686 418 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 BMXP51813 675 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 LUMP51884 338 aaPredicted RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 DVL1P1P54792 670 aaPredicted RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 MFAP4P55083 255 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 ARF5P84085 180 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 IFT88Q13099 833 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 VEPH1Q14D04 833 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 DPCR1Q3MIW9 517 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 ANKRD20A4Q4UJ75 823 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 CEP55Q53EZ4 464 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 ANKRD20A8PQ5CZ79 823 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 KCNT1Q5JUK3 1230 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 ANKRD20A2Q5SQ80 823 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 ANKRD20A1Q5TYW2 823 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 ANKRD20A3Q5VUR7 823 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 JADE1Q6IE81 842 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 LRRC8EQ6NSJ5 796 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 RGMBQ6NW40 437 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 SLC36A4Q6YBV0 504 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 RBPMS2Q6ZRY4 209 aaKnown RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 GPAT4Q86UL3 456 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS36-205ENST00000492650 MRPL43Q8N983 215 aaKnown RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 XXYLT1Q8NBI6 393 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 CNNM3Q8NE01 707 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 MAGEC3Q8TD91 643 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 SLC20A1Q8WUM9 679 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 CORO2AQ92828 525 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 ERO1AQ96HE7 468 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 C1orf74Q96LT6 269 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 PRAM1Q96QH2 718 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 SLC25A23Q9BV35 468 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 CCDC106Q9BWC9 280 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 STRA6Q9BX79 667 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 C1QTNF5Q9BXJ0 243 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 HSD3B7Q9H2F3 369 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 DNAJC18Q9H819 358 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 ABCB8Q9NUT2 735 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 CHCHD3Q9NX63 227 aaKnown RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 WSB2Q9NYS7 404 aaPredicted RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 IL1RAPL1Q9NZN1 696 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 PEMTQ9UBM1 199 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 FBXL17Q9UF56 701 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 AMACRQ9UHK6 382 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 LEF1Q9UJU2 399 aaPredicted RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 CPSF3Q9UKF6 684 aaKnown RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 APPL1Q9UKG1 709 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 PADI1Q9ULC6 663 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 NENFQ9UMX5 172 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 MTMR6Q9Y217 621 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 PCDHGA5Q9Y5G8 931 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 PCDHGA1Q9Y5H4 931 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 MMP24Q9Y5R2 645 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 SNED1Q8TER0 1413 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 LOC100509620A0A075B734 347 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 LILRA5A6NI73 299 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 MCF2LO15068 1137 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 ADAMDEC1O15204 470 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 PAPSS1O43252 624 aaPredicted RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 RIPK2O43353 540 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 KLK8O60259 260 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 DIAPH2O60879 1101 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 OPN1MWP04001 364 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 INHBAP08476 426 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 HMOX1P09601 288 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 OPN1MW2P0DN77 364 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 OPN1MW3P0DN78 364 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 ETFAP13804 333 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 FERP16591 822 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 CCNA2P20248 432 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 PBLDP30039 288 aaPredicted RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 ACAA2P42765 397 aaKnown RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 SEC61BP60468 96 aaKnown RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 EFNB1P98172 346 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 CEBPZQ03701 1054 aaKnown RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 COX10Q12887 443 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 NPRL3Q12980 569 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 CSTF3Q12996 717 aaKnown RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 TRADDQ15628 312 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 GSTA3Q16772 222 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 SHROOM1Q2M3G4 852 aaPredicted RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 ASTE1Q2TB18 679 aaPredicted RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 HFEQ30201 348 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 SERTAD4-AS1Q5TG53 156 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 ZNF772Q68DY9 489 aaPredicted RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 KIAA0930Q6ICG6 404 aaPredicted RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 PLEKHM3Q6ZWE6 761 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 SLC46A3Q7Z3Q1 461 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 NFE4Q86UQ8 179 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 NOXA1Q86UR1 476 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 TMEM219Q86XT9 240 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 KMT5CQ86Y97 462 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 CNTN4Q8IWV2 1026 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 ZCCHC9Q8N567 271 aaKnown RBP3.19□□□□□ -1.9
VPS36-205ENST00000492650 PLD5Q8N7P1 536 aa3.19□□□□□ -1.9
VPS36-205ENST00000492650 ATAD1Q8NBU5 361 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms