RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	PPP1R36	Q96LQ0	422 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	NSMCE2	Q96MF7	247 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	MCCC1	Q96RQ3	725 aa	Predicted RBP	6.23	□□□□□ -1.41
FN1-223	ENST00000490833	SLC12A9	Q9BXP2	914 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	DPY30	Q9C005	99 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	RNF38	Q9H0F5	515 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	MTIF3	Q9H2K0	278 aa	Known RBP	6.23	□□□□□ -1.41
FN1-223	ENST00000490833	EBF3	Q9H4W6	596 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	NOL11	Q9H8H0	719 aa	Known RBP	6.23	□□□□□ -1.41
FN1-223	ENST00000490833	SEMA4B	Q9NPR2	832 aa	Predicted RBP	6.23	□□□□□ -1.41
FN1-223	ENST00000490833	AGPAT4	Q9NRZ5	378 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	C1orf109	Q9NX04	203 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	WWOX	Q9NZC7	414 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	PTTG2	Q9NZH5	202 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	GALP	Q9UBC7	116 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	DKK3	Q9UBP4	350 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	LHX3	Q9UBR4	397 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	FKBPL	Q9UIM3	349 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	INSL6	Q9Y581	213 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	KCTD3	Q9Y597	815 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	PCDHA9	Q9Y5H5	950 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	CPQ	Q9Y646	472 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	AK5	Q9Y6K8	562 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	MIA3	Q5JRA6	1907 aa		6.23	□□□□□ -1.41
FN1-223	ENST00000490833	FRMPD3	Q5JV73	1810 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	IGLV3-16	A0A075B6K0	115 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	OR51F1	A6NGY5	319 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF839	A8K0R7	811 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	NT5C1B-RDH14	C9J2C7	533 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833		H0Y858	1186 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	SGTA	O43765	313 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	NUAK1	O60285	661 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TSPAN3	O60637	253 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	MRPS14	O60783	128 aa	Known RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	NOL3	O60936	208 aa	Known RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	RASAL1	O95294	804 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	BMP10	O95393	424 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	SEC24A	O95486	1093 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TIMP1	P01033	207 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	CAPN1	P07384	714 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ANXA6	P08133	673 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	CLTB	P09497	229 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	LINGO3	P0C6S8	592 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	UBTFL6	P0CB48	400 aa	Predicted RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	CDH1	P12830	882 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ATP1B2	P14415	290 aa	Predicted RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF23	P17027	643 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	POLR2E	P19388	210 aa	Known RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	XPA	P23025	273 aa	Predicted RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	PTX3	P26022	381 aa	Predicted RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	GABRR2	P28476	465 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	GSTT1	P30711	240 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	HSD17B2	P37059	387 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	HNF4A	P41235	474 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	CSK	P41240	450 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	GSTM5	P46439	218 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ASMT	P46597	345 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	NUP107	P57740	925 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	PHEX	P78562	749 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ECT2L	Q008S8	904 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	LIPE	Q05469	1076 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TRAF2	Q12933	501 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	CSTF3	Q12996	717 aa	Known RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	LAPTM5	Q13571	262 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TUBA3C	Q13748	450 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	BOP1	Q14137	746 aa	Known RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ELOA	Q14241	798 aa	Known RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	GPNMB	Q14956	572 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	NR6A1	Q15406	480 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ATP6AP1	Q15904	470 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	CYP51A1	Q16850	503 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	LRRC36	Q1X8D7	754 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	AP5B1	Q2VPB7	878 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF284	Q2VY69	593 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	SFT2D3	Q587I9	215 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ANXA8L1	Q5VT79	327 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	LPCAT4	Q643R3	524 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ERAP2	Q6P179	960 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	B3GNT6	Q6ZMB0	384 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ATG14	Q6ZNE5	492 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	C16orf59	Q7L2K0	433 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TAS1R1	Q7RTX1	841 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	PATL1	Q86TB9	770 aa	Known RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	PIM3	Q86V86	326 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	CIR1	Q86X95	450 aa	Predicted RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	KRTAP1-3	Q8IUG1	177 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ZDHHC13	Q8IUH4	622 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	FUNDC1	Q8IVP5	155 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	DHRSX	Q8N5I4	330 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TTC9B	Q8N6N2	239 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	L3MBTL4	Q8NA19	623 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	SIDT2	Q8NBJ9	832 aa	Known RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TSPAN14	Q8NG11	270 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF420	Q8TAQ5	688 aa	Predicted RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	PHOSPHO2	Q8TCD6	241 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TFAP2C	Q92754	450 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	CLP1	Q92989	425 aa	Known RBP	6.22	□□□□□ -1.41
FN1-223	ENST00000490833	EXT2	Q93063	718 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TESC	Q96BS2	214 aa		6.22	□□□□□ -1.41
FN1-223	ENST00000490833	TBC1D20	Q96BZ9	403 aa		6.22	□□□□□ -1.41

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