RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SLC9A3P48764 834 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 CSE1LP55060 971 aaKnown RBP3.69□□□□□ -1.82
CD46-216ENST00000490278 RPS18P62269 152 aaKnown RBP3.69□□□□□ -1.82
CD46-216ENST00000490278 RALGDSQ12967 914 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 ZNF628Q5EBL2 1059 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 FAM76BQ5HYJ3 339 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 MDH1BQ5I0G3 518 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 CCNYL2Q5T2Q4 361 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 LINGO4Q6UY18 593 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 TMPRSS11FQ6ZWK6 438 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 IQCHQ86VS3 1027 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 CRYBG2Q8N1P7 616 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 CPSF7Q8N684 471 aaKnown RBP3.69□□□□□ -1.82
CD46-216ENST00000490278 ZBTB8BQ8NAP8 495 aaPredicted RBP3.69□□□□□ -1.82
CD46-216ENST00000490278 ZNF473Q8WTR7 871 aaKnown RBP3.69□□□□□ -1.82
CD46-216ENST00000490278 SECISBP2LQ93073 1101 aaKnown RBP3.69□□□□□ -1.82
CD46-216ENST00000490278 SLAMF9Q96A28 289 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 ST6GAL2Q96JF0 529 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 BTBD10Q9BSF8 475 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 OR10A4Q9H209 315 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 NOL11Q9H8H0 719 aaKnown RBP3.69□□□□□ -1.82
CD46-216ENST00000490278 ACKR4Q9NPB9 350 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 TCF7L2Q9NQB0 619 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 OLFML3Q9NRN5 406 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 ZFP57Q9NU63 452 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 DPP3Q9NY33 737 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 TAAR2Q9P1P5 351 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 SLC24A2Q9UI40 661 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 OSGIN1Q9UJX0 560 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 LRP12Q9Y561 859 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 DOCK7Q96N67 2140 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 URADA6NGE7 173 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 PRKNO60260 465 aaPredicted RBP3.68□□□□□ -1.82
CD46-216ENST00000490278 OR10H2O60403 315 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 TADA2AO75478 443 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 HOXB6P17509 224 aaKnown RBP3.68□□□□□ -1.82
CD46-216ENST00000490278 ITGB6P18564 788 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 MC5RP33032 325 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 MTHFRP42898 656 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 NR2C2P49116 596 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 RAB28P51157 221 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 THOP1P52888 689 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 ARMC4Q5T2S8 1044 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 CST9LP1Q5W188 147 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 FAM198BQ6UWH4 519 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 RBPMS2Q6ZRY4 209 aaKnown RBP3.68□□□□□ -1.82
CD46-216ENST00000490278 DGLUCYQ7Z3D6 616 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 COMMD2Q86X83 199 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 FAM114A1Q8IWE2 563 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 CEP57L1Q8IYX8 460 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 CIARTQ8N365 385 aaPredicted RBP3.68□□□□□ -1.82
CD46-216ENST00000490278 TTC30BQ8N4P2 665 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 XXYLT1Q8NBI6 393 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 OR6J1Q8NGC5 347 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 OR5M8Q8NGP6 311 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 RNF128Q8TEB7 428 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 ATL1Q8WXF7 558 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 ZNF653Q96CK0 615 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 HDAC11Q96DB2 347 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 RMDN1Q96DB5 314 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 SPDL1Q96EA4 605 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 RADILQ96JH8 1075 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 LINC00615Q96LM1 132 aaPredicted RBP3.68□□□□□ -1.82
CD46-216ENST00000490278 SGK494Q96LW2 274 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 CFAP57Q96MR6 1250 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 SEPHS2Q99611 448 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 EPYCQ99645 322 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 AP1M1Q9BXS5 423 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 TFB2MQ9H5Q4 396 aaKnown RBP3.68□□□□□ -1.82
CD46-216ENST00000490278 CNOT10Q9H9A5 744 aaKnown RBP3.68□□□□□ -1.82
CD46-216ENST00000490278 ZBTB20Q9HC78 741 aaPredicted RBP3.68□□□□□ -1.82
CD46-216ENST00000490278 PRMT7Q9NVM4 692 aaPredicted RBP3.68□□□□□ -1.82
CD46-216ENST00000490278 FAM118AQ9NWS6 357 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 PTTG2Q9NZH5 202 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 C5AR2Q9P296 337 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 ICAM5Q9UMF0 924 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 JRKLQ9Y4A0 524 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 CCL27Q9Y4X3 112 aa3.68□□□□□ -1.82
CD46-216ENST00000490278 A0A1W2PRB8 838 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 FEZF1A0PJY2 475 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 HYKKA2RU49 373 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 FAM172BPA6NC97 362 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 TMEM221A6NGB7 291 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 P2RY10O00398 339 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 MEIS2O14770 477 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 SPRY1O43609 319 aaPredicted RBP3.67□□□□□ -1.82
CD46-216ENST00000490278 FGF17O60258 216 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 APOA4P06727 396 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 NR1D1P20393 614 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 MSH3P20585 1137 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 SLC6A6P31641 620 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 PCGF2P35227 344 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 RAD23AP54725 363 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 TPD52P55327 224 aaPredicted RBP3.67□□□□□ -1.82
CD46-216ENST00000490278 HNRNPKP61978 463 aaKnown RBP eCLIP3.67□□□□□ -1.829e-8■■■□□ 15.5
CD46-216ENST00000490278 DMP1Q13316 513 aaPredicted RBP3.67□□□□□ -1.82
CD46-216ENST00000490278 PTPRCAPQ14761 206 aa3.67□□□□□ -1.82
CD46-216ENST00000490278 RBBP5Q15291 538 aaKnown RBP3.67□□□□□ -1.82
CD46-216ENST00000490278 KLHL26Q53HC5 615 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms