RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 LPCAT1Q8NF37 534 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 GLYATL1Q969I3 302 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 MCEEQ96PE7 176 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 PCDHB18PQ96TA0 734 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 SMR3AQ99954 134 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 SNRNP25Q9BV90 132 aaKnown RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 NAA15Q9BXJ9 866 aaKnown RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 TDRD1Q9BXT4 1180 aaKnown RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 KLHL25Q9H0H3 589 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 ENAMQ9NRM1 1142 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 IMP3Q9NV31 184 aaKnown RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 CWC15Q9P013 229 aaKnown RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 ADAM22Q9P0K1 906 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 IFT80Q9P2H3 777 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 DNPEPQ9ULA0 475 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 ZDHHC9Q9Y397 364 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 CFAP20Q9Y6A4 193 aaKnown RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 RGSL1A5PLK6 1076 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 F8VZ95 297 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 BIN1O00499 593 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 SOCS6O14544 535 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 SLC19A2O60779 497 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 CDK14O94921 469 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 IL2RAP01589 272 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 HBQ1P09105 142 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 MSL3P1P0C860 447 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 MTHFD1P11586 935 aaKnown RBP8.87□□□□□ -0.99
SSBP1-212ENST00000489378 UNGP13051 313 aaPredicted RBP8.87□□□□□ -0.99
SSBP1-212ENST00000489378 ST6GAL1P15907 406 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 POLR2CP19387 275 aaPredicted RBP8.87□□□□□ -0.99
SSBP1-212ENST00000489378 ITKQ08881 620 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 MFAP5Q13361 173 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 ANKRD20A8PQ5CZ79 823 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 MARC1Q5VT66 337 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 KLHDC7AQ5VTJ3 777 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 IRAK1BP1Q5VVH5 260 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 TRAPPC5Q8IUR0 188 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 SPATA3Q8NHX4 192 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 THOC3Q96J01 351 aaKnown RBP8.87□□□□□ -0.99
SSBP1-212ENST00000489378 C17orf62Q9BQA9 187 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 NUP85Q9BW27 656 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 LHPPQ9H008 270 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 SYTL2Q9HCH5 934 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 CCM2LQ9NUG4 571 aaPredicted RBP8.87□□□□□ -0.99
SSBP1-212ENST00000489378 ETNK2Q9NVF9 386 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 PLA2G3Q9NZ20 509 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 ABI3Q9P2A4 366 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 NDOR1Q9UHB4 597 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 PCSK1NQ9UHG2 260 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 SLC24A2Q9UI40 661 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 POMT2Q9UKY4 750 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 TMPRSS11EQ9UL52 423 aa8.87□□□□□ -0.99
SSBP1-212ENST00000489378 EIF3CLB5ME19 914 aaKnown RBP8.86□□□□□ -0.99
SSBP1-212ENST00000489378 GFPT2O94808 682 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 FGFR1OPO95684 399 aaKnown RBP8.86□□□□□ -0.99
SSBP1-212ENST00000489378 PVRP15151 417 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 FOSL1P15407 271 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 VCLP18206 1134 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 AMPD1P23109 780 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 MMP11P24347 488 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 NSFP46459 744 aaKnown RBP8.86□□□□□ -0.99
SSBP1-212ENST00000489378 TNFSF10P50591 281 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 CASP6P55212 293 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 ARG2P78540 354 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 DCDP81605 110 aaKnown RBP8.86□□□□□ -0.99
SSBP1-212ENST00000489378 INAQ16352 499 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 LONRF1Q17RB8 773 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 ERMARDQ5T6L9 678 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 TMEM198Q66K66 360 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 DNAJC24Q6P3W2 148 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 KIRREL2Q6UWL6 708 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 CDHR3Q6ZTQ4 885 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 CYP4V2Q6ZWL3 525 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-212ENST00000489378 ZNF677Q86XU0 584 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 PHF13Q86YI8 300 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-212ENST00000489378 ATPAF2Q8N5M1 289 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 TRAM1L1Q8N609 369 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 CCHCR1Q8TD31 782 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 ZNF592Q92610 1267 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 LMF1Q96S06 567 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 EIF3CQ99613 913 aaKnown RBP8.86□□□□□ -0.99
SSBP1-212ENST00000489378 MESP1Q9BRJ9 268 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 ZSCAN5AQ9BUG6 496 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 SPRTNQ9H040 489 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-212ENST00000489378 TIMMDC1Q9NPL8 285 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 C1GALT1Q9NS00 363 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 SLC22A11Q9NSA0 550 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 CDC23Q9UJX2 597 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 MEMO1Q9Y316 297 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 HS3ST3B1Q9Y662 390 aa8.86□□□□□ -0.99
SSBP1-212ENST00000489378 FBN1P35555 2871 aaKnown RBP8.86□□□□□ -0.99
SSBP1-212ENST00000489378 GTF3C1Q12789 2109 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 ANKRD62A6NC57 917 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 H3BMH7 237 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 HCRTR1O43613 425 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 F10P00742 488 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 CTSBP07858 339 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 UCHL3P15374 230 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 HLA-DPA1P20036 260 aa8.85□□□□□ -0.99
SSBP1-212ENST00000489378 MTIF2P46199 727 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms