RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 SLC25A18Q9H1K4 315 aa12.21□□□□□ -0.45
SRRM1-216ENST00000489130 TFB2MQ9H5Q4 396 aaKnown RBP12.21□□□□□ -0.45
SRRM1-216ENST00000489130 MVB12BQ9H7P6 319 aa12.21□□□□□ -0.45
SRRM1-216ENST00000489130 LZTFL1Q9NQ48 299 aa12.21□□□□□ -0.45
SRRM1-216ENST00000489130 FGF21Q9NSA1 209 aa12.21□□□□□ -0.45
SRRM1-216ENST00000489130 BTRCQ9Y297 605 aa12.21□□□□□ -0.45
SRRM1-216ENST00000489130 ZKSCAN5Q9Y2L8 839 aa12.21□□□□□ -0.45
SRRM1-216ENST00000489130 PCDHGA6Q9Y5G7 932 aa12.21□□□□□ -0.45
SRRM1-216ENST00000489130 MRPS18BQ9Y676 258 aaKnown RBP12.21□□□□□ -0.45
SRRM1-216ENST00000489130 PRSS21Q9Y6M0 314 aa12.21□□□□□ -0.45
SRRM1-216ENST00000489130 PIEZO2Q9H5I5 2752 aa12.21□□□□□ -0.46
SRRM1-216ENST00000489130 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
SRRM1-216ENST00000489130 SLC28A2O43868 658 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 FTH1P02794 183 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 APRTP07741 180 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 POLR2CP19387 275 aaPredicted RBP12.2□□□□□ -0.46
SRRM1-216ENST00000489130 TCN2P20062 427 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 ADRA1DP25100 572 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 PREPP48147 710 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 ARCN1P48444 511 aaKnown RBP12.2□□□□□ -0.46
SRRM1-216ENST00000489130 LMAN1P49257 510 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 PRKAA1Q13131 559 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 KCNAB2Q13303 367 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 SNX1Q13596 522 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 BOP1Q14137 746 aaKnown RBP12.2□□□□□ -0.46
SRRM1-216ENST00000489130 TSTD2Q5T7W7 516 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 LYPLAL1Q5VWZ2 237 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 NLRP9Q7RTR0 991 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 LRRC8AQ8IWT6 810 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 OR52E1Q8NGJ3 308 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 OR8K5Q8NH50 307 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 TFGQ92734 400 aaPredicted RBP12.2□□□□□ -0.46
SRRM1-216ENST00000489130 HDAC10Q969S8 669 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.2□□□□□ -0.46
SRRM1-216ENST00000489130 ZNF501Q96CX3 271 aaPredicted RBP12.2□□□□□ -0.46
SRRM1-216ENST00000489130 PPM1MQ96MI6 270 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 ZNF778Q96MU6 729 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 FAM117AQ9C073 453 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 SRMSQ9H3Y6 488 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 LHX9Q9NQ69 397 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 EIF2B3Q9NR50 452 aaKnown RBP12.2□□□□□ -0.46
SRRM1-216ENST00000489130 C1GALT1Q9NS00 363 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 SLC2A6Q9UGQ3 507 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 KCND3Q9UK17 655 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 PADI1Q9ULC6 663 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 TCAF1Q9Y4C2 921 aa12.2□□□□□ -0.46
SRRM1-216ENST00000489130 C21orf140B9A014 251 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 BTN3A3O00478 584 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 GOT2P00505 430 aaKnown RBP12.19□□□□□ -0.46
SRRM1-216ENST00000489130 OR56A5P0C7T3 313 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 CCNYL3P0C7X3 344 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 ACADLP28330 430 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 PRDX3P30048 256 aaKnown RBP12.19□□□□□ -0.46
SRRM1-216ENST00000489130 RPL22P35268 128 aaKnown RBP12.19□□□□□ -0.46
SRRM1-216ENST00000489130 PLOD1Q02809 727 aaPredicted RBP12.19□□□□□ -0.46
SRRM1-216ENST00000489130 TMTC4Q5T4D3 741 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 ATP1A1-AS1Q5TC04 95 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 ZNF534Q76KX8 674 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 AMIGO1Q86WK6 493 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 TRIM58Q8NG06 486 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 OR4L1Q8NH43 312 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 APOBEC4Q8WW27 367 aaKnown RBP12.19□□□□□ -0.46
SRRM1-216ENST00000489130 ELMO1Q92556 727 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 TTC1Q99614 292 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 HGH1Q9BTY7 390 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 TLR10Q9BXR5 811 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 PITPNM3Q9BZ71 974 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 LATS2Q9NRM7 1088 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 DRG1Q9Y295 367 aaKnown RBP12.19□□□□□ -0.46
SRRM1-216ENST00000489130 PCDHB3Q9Y5E6 796 aa12.19□□□□□ -0.46
SRRM1-216ENST00000489130 HEMK1Q9Y5R4 338 aaPredicted RBP12.19□□□□□ -0.46
SRRM1-216ENST00000489130 SLC5A10A0PJK1 596 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 GSAPA4D1B5 854 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 SLC9B1P1A6NJY1 282 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 BHMG1C9JSJ3 638 aaPredicted RBP12.18□□□□□ -0.46
SRRM1-216ENST00000489130 F8W8V4 182 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 BTN3A1O00481 513 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 SUV39H1O43463 412 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 OR1I1O60431 355 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 CPNE3O75131 537 aaKnown RBP12.18□□□□□ -0.46
SRRM1-216ENST00000489130 RECKO95980 971 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 FGGP02679 453 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 NTRK1P04629 796 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 ZSCAN5DPP0CG00 497 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 CDH3P22223 829 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 CCZ1BP86790 482 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 CCZ1P86791 482 aaPredicted RBP12.18□□□□□ -0.46
SRRM1-216ENST00000489130 PRKG2Q13237 762 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 DNASE1L3Q13609 305 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 GPR19Q15760 415 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 DEFB109BQ30KR1 87 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 FBXO38Q6PIJ6 1188 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 C4orf22Q6V702 233 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 ZNF517Q6ZMY9 492 aaPredicted RBP12.18□□□□□ -0.46
SRRM1-216ENST00000489130 PRICKLE2Q7Z3G6 844 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 ADGRF3Q8IZF5 1079 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 PHC3Q8NDX5 983 aa12.18□□□□□ -0.46
SRRM1-216ENST00000489130 PPHLN1Q8NEY8 458 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms