RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	SNAPC3	Q92966	411 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	NCLN	Q969V3	563 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	TMCO6	Q96DC7	493 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	ZFYVE19	Q96K21	471 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	APOL4	Q9BPW4	351 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	TTYH2	Q9BSA4	534 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	NAT9	Q9BTE0	207 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	WASH6P	Q9NQA3	447 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	TAS2R9	Q9NYW1	312 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	TAS2R7	Q9NYW3	318 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	USE1	Q9NZ43	259 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	GLTP	Q9NZD2	209 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	WRAP73	Q9P2S5	460 aa	Predicted RBP	4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	ZDHHC2	Q9UIJ5	367 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	INTS6	Q9UL03	887 aa	Known RBP	4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	AURKC	Q9UQB9	309 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	ANKRD6	Q9Y2G4	727 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	MTF2	Q9Y483	593 aa	Predicted RBP	4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	PCDHGB3	Q9Y5G1	929 aa		4.69	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	STRCP1	A6NGW2	1772 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	LOC110117498-PIK3R3	F6TDL0	507 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131		H0Y626	953 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131		H3BS24	57 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	FXYD1	O00168	92 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	UPK1A	O00322	258 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	PI15	O43692	258 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	USP12	O75317	370 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	UGT2B17	O75795	530 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	SOAT2	O75908	522 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	CD4	P01730	458 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	APRT	P07741	180 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	RBP1	P09455	135 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	DBT	P11182	482 aa	Known RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	CHRM3	P20309	590 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	TGM2	P21980	687 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	HIBADH	P31937	336 aa	Known RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	TGFBR2	P37173	567 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	SEPHS1	P49903	392 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	SERPINH1	P50454	418 aa	Known RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	UGT2B15	P54855	530 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	VBP1	P61758	197 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	NCS1	P62166	190 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	CCNA1	P78396	465 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	EMX1	Q04741	257 aa	Predicted RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	GABPA	Q06546	454 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	CUL2	Q13617	745 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	RIN1	Q13671	783 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	GNA13	Q14344	377 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	QRICH1	Q2TAL8	776 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	CTU2	Q2VPK5	515 aa	Known RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	TBRG1	Q3YBR2	411 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	ZACN	Q401N2	412 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	GPAT3	Q53EU6	434 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	BRDT	Q58F21	947 aa	Predicted RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	COLEC12	Q5KU26	742 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	CLVS2	Q5SYC1	327 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	DPY19L3	Q6ZPD9	716 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	KCTD1	Q719H9	257 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	RNF180	Q86T96	592 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	SLC22A15	Q8IZD6	547 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	LINC00518	Q8N0U6	118 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	PARP16	Q8N5Y8	322 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	FNDC5	Q8NAU1	212 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	APPL2	Q8NEU8	664 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	VPS37A	Q8NEZ2	397 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	OR4M2	Q8NGB6	313 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	OR4M1	Q8NGD0	313 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	STYX	Q8WUJ0	223 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	HERVK_113	Q902F9	699 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	RORB	Q92753	470 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	CYP2S1	Q96SQ9	504 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	MBOAT4	Q96T53	435 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	RBBP8	Q99708	897 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	ZSCAN5A	Q9BUG6	496 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	BDH2	Q9BUT1	245 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	WDR11	Q9BZH6	1224 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	SERHL2	Q9H4I8	314 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	IFT22	Q9H7X7	185 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	KAT8	Q9H7Z6	458 aa	Known RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	MEAF6	Q9HAF1	191 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	NMRAL1	Q9HBL8	299 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	EIF2B3	Q9NR50	452 aa	Known RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	CHRAC1	Q9NRG0	131 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	MAT2B	Q9NZL9	334 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	NDOR1	Q9UHB4	597 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	RAPGEFL1	Q9UHV5	662 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	ATP6V1H	Q9UI12	483 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	TRMT6	Q9UJA5	497 aa	Known RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	KLHL21	Q9UJP4	597 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	CPSF3	Q9UKF6	684 aa	Known RBP	4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	PCDHGB6	Q9Y5F9	930 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	PCDHGB2	Q9Y5G2	931 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	PCDHA1	Q9Y5I3	950 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	PSAT1	Q9Y617	370 aa		4.68	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	PNMA8C	A0A1B0GUJ8	204 aa		4.67	□□□□□ -1.66
CDC42BPA-213	ENST00000488131	LINC00854	A0A1B0GVQ3	168 aa		4.67	□□□□□ -1.66

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