RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 ZRSR2Q15696 482 aaKnown RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 DCAF6Q58WW2 860 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 DENND2CQ68D51 928 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 SLC9A4Q6AI14 798 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 MZT2AQ6P582 158 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 ZDHHC24Q6UX98 284 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 GCNT7Q6ZNI0 430 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 C4orf50Q6ZRC1 276 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 Q6ZSR6 202 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 C1orf186Q6ZWK4 172 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 PRPF39Q86UA1 669 aaKnown RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 CHD1LQ86WJ1 897 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 CACNA2D3Q8IZS8 1091 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 NUP93Q8N1F7 819 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 KRT78Q8N1N4 520 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 SIRT6Q8N6T7 355 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 Q8N9G6 341 aaPredicted RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 DNAJB14Q8TBM8 379 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 SLC45A3Q96JT2 553 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 BMFQ96LC9 184 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 CATSPER2Q96P56 530 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 GFM1Q96RP9 751 aaKnown RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 MRPL45Q9BRJ2 306 aaKnown RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 NACA2Q9H009 215 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 CLPBQ9H078 707 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 ABCB8Q9NUT2 735 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 SIX4Q9UIU6 781 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 SARDHQ9UL12 918 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 AGO1Q9UL18 857 aaKnown RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 ABCA4P78363 2273 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 ZGRF1Q86YA3 2104 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 POM121BA6NF01 834 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 NEMP2A6NFY4 417 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 PRAMEF26H0Y7S4 382 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 STMND1H3BQB6 276 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 H7C1Q1 480 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 RAD51BO15315 384 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 CD3EAPO15446 510 aaKnown RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 LRRTM2O43300 516 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 AQP9O43315 295 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 TIMM44O43615 452 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 RRP9O43818 475 aaKnown RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 RAD1O60671 282 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 JAK2O60674 1132 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 PPP6R2O75170 966 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 TPH1P17752 444 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 PAX3P23760 479 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 RPA1P27694 616 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 LEPRP48357 1165 aaKnown RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 LHX1P48742 406 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 ART1P52961 327 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 TAS2R38P59533 333 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 NUCB1Q02818 461 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 OVGP1Q12889 678 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 EIF3IQ13347 325 aaKnown RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 PTK2BQ14289 1009 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 PTCHD3Q3KNS1 767 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 TMEM198Q66K66 360 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 RINT1Q6NUQ1 792 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 NAPRTQ6XQN6 538 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 TRIM72Q6ZMU5 477 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 TMEM86AQ8N2M4 240 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 ZMIZ2Q8NF64 920 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 DDI1Q8WTU0 396 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 REPS1Q96D71 796 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 SNRNP40Q96DI7 357 aaKnown RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 DAZAP1Q96EP5 407 aaKnown RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 BICD1Q96G01 975 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 LMLNQ96KR4 655 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 NTPCRQ9BSD7 190 aaKnown RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 MSTO1Q9BUK6 570 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 SPRY4Q9C004 299 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 STRADBQ9C0K7 418 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 CHST8Q9H2A9 424 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 LRRN3Q9H3W5 708 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 PNPLA8Q9NP80 782 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 TRIM36Q9NQ86 728 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 ASF1BQ9NVP2 202 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 GDAP2Q9NXN4 497 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 SUN2Q9UH99 717 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 SLCO3A1Q9UIG8 710 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 AMFRQ9UKV5 643 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 INTS6Q9UL03 887 aaKnown RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 CDH9Q9ULB4 789 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 FZD4Q9ULV1 537 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 PLA2G4CQ9UP65 541 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 DRG1Q9Y295 367 aaKnown RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 RPH3AQ9Y2J0 694 aaPredicted RBP4.38□□□□□ -1.71
CNN3-206ENST00000487539 DERAQ9Y315 318 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 C2CD2Q9Y426 696 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 PCDHGB6Q9Y5F9 930 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 SNX13Q9Y5W8 968 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 RNF215Q9Y6U7 377 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 MYH11P35749 1972 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 AKAP6Q13023 2319 aa4.38□□□□□ -1.71
CNN3-206ENST00000487539 VPS13CQ709C8 3753 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 CCDC196A0A1B0GTZ2 297 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 FAM92AA1XBS5 289 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 ANKUB1A6NFN9 424 aa4.37□□□□□ -1.71
CNN3-206ENST00000487539 DNAJC9-AS1A6NH13 148 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms