RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SMARCAL1Q9NZC9 954 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 POMT2Q9UKY4 750 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 PRSS21Q9Y6M0 314 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 HECTD1Q9ULT8 2610 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 OR51F1A6NGY5 319 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 C21orf140B9A014 251 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 IFRD1O00458 451 aaPredicted RBP23.85■■□□□ 1.41
LIME1-206ENST00000487026 BTN3A1O00481 513 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 CASRP41180 1078 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 CACNG1Q06432 222 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 GPS2Q13227 327 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 IGFBP7Q16270 282 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 SPC24Q8NBT2 197 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 OR52E1Q8NGJ3 308 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 STYXQ8WUJ0 223 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 MR1Q95460 341 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 HES6Q96HZ4 224 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 ALS2CR12Q96Q35 445 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 KLHL25Q9H0H3 589 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 ANAPC2Q9UJX6 822 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 BTRCQ9Y297 605 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 CAPN6Q9Y6Q1 641 aa23.85■■□□□ 1.41
LIME1-206ENST00000487026 PSMD3O43242 534 aa23.84■■□□□ 1.41
LIME1-206ENST00000487026 CPNE3O75131 537 aaKnown RBP23.84■■□□□ 1.41
LIME1-206ENST00000487026 PRDX3P30048 256 aaKnown RBP23.84■■□□□ 1.41
LIME1-206ENST00000487026 BRD3Q15059 726 aa23.84■■□□□ 1.41
LIME1-206ENST00000487026 P3H1Q32P28 736 aa23.84■■□□□ 1.41
LIME1-206ENST00000487026 CARFQ8N187 725 aa23.84■■□□□ 1.41
LIME1-206ENST00000487026 OR52K1Q8NGK4 314 aa23.84■■□□□ 1.41
LIME1-206ENST00000487026 VPS37BQ9H9H4 285 aa23.84■■□□□ 1.41
LIME1-206ENST00000487026 C1GALT1Q9NS00 363 aa23.84■■□□□ 1.41
LIME1-206ENST00000487026 TLK1Q9UKI8 766 aa23.84■■□□□ 1.41
LIME1-206ENST00000487026 MAN2B2Q9Y2E5 1009 aa23.84■■□□□ 1.41
LIME1-206ENST00000487026 MROH6A6NGR9 719 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 MKRN2OSH3BPM6 223 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 ARHGAP6O43182 974 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 DNAJB5O75953 348 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 ST6GAL1P15907 406 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 PTPN4P29074 926 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 CD151P48509 253 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 RPS15P62841 145 aaKnown RBP23.83■■□□□ 1.41
LIME1-206ENST00000487026 LCN10Q6JVE6 187 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 ZNF449Q6P9G9 518 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 NAPRTQ6XQN6 538 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 OR8K5Q8NH50 307 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 TFGQ92734 400 aaPredicted RBP23.83■■□□□ 1.41
LIME1-206ENST00000487026 HGH1Q9BTY7 390 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 GPR87Q9BY21 358 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 CHST8Q9H2A9 424 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 TFB2MQ9H5Q4 396 aaKnown RBP23.83■■□□□ 1.41
LIME1-206ENST00000487026 MVB12BQ9H7P6 319 aa23.83■■□□□ 1.41
LIME1-206ENST00000487026 FARSAQ9Y285 508 aaKnown RBP23.83■■□□□ 1.41
LIME1-206ENST00000487026 SPTBP11277 2137 aa23.83■■□□□ 1.4
LIME1-206ENST00000487026 CCDC162PA2VCL2 907 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 RFPL1O75677 317 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 RECKO95980 971 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 PVRP15151 417 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 MSNP26038 577 aaKnown RBP23.82■■□□□ 1.4
LIME1-206ENST00000487026 ABRQ12979 859 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 BOP1Q14137 746 aaKnown RBP23.82■■□□□ 1.4
LIME1-206ENST00000487026 PRUNE1Q86TP1 453 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 AMIGO1Q86WK6 493 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 TXLNBQ8N3L3 684 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 OR1L3Q8NH93 324 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 TRIM55Q9BYV6 548 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 ETNK1Q9HBU6 452 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 FLNCQ14315 2725 aa23.82■■□□□ 1.4
LIME1-206ENST00000487026 TMEM150CB9EJG8 249 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 MATN2O00339 956 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 AP2A2O94973 939 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 LMAN1P49257 510 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 PMS2P54278 862 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 RPA4Q13156 261 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 IL10RAQ13651 578 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 PLEKHS1Q5SXH7 462 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 FAM69BQ5VUD6 431 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 LINC00523Q86TU6 105 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 ADGRF3Q8IZF5 1079 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 DNAAF3Q8N9W5 541 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 OR5AR1Q8NGP9 310 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 NBASA2RRP1 2371 aa23.81■■□□□ 1.4
LIME1-206ENST00000487026 IFNB1P01574 187 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 KLK3P07288 261 aaPredicted RBP23.8■■□□□ 1.4
LIME1-206ENST00000487026 FOXN2P32314 431 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 GRIA1P42261 906 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 NSG1P42857 185 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 KLRB1Q12918 225 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 SEMA5AQ13591 1074 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 LAMB3Q13751 1172 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 UGT8Q16880 541 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 TCTN3Q6NUS6 607 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 ASB18Q6ZVZ8 466 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 ELMO1Q92556 727 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 CLIP3Q96DZ5 547 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 TRAPPC9Q96Q05 1148 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 FANCEQ9HB96 536 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 LATS2Q9NRM7 1088 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 SLC2A6Q9UGQ3 507 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 PIKFYVEQ9Y2I7 2098 aa23.8■■□□□ 1.4
LIME1-206ENST00000487026 CYSRT1A8MQ03 144 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms